Tableau information
Concept source: d3sajc_ amino acid (a.a.) range (THR75)(PRO93)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR75) (LEU86) H1
(VAL88) (PRO93) E2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -141.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1t09a_ : (LEU250) (ASN271) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |NADP-dependent isocitrate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1ygya4 : (ALA387) (SER404) [view usage] : d.81.2.2 |FwdE/GAPDH domain-like |Serine metabolism enzymes domain |SerA intervening domain-like |D-3-phosphoglycerate dehydrogenase SerA |Mycobacterium tuberculosis [TaxId: 1773]
d2jbwa1 : (ARG282) (GLY297) [view usage] : c.69.1.41 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |2,6-dihydropseudooxynicotine hydrolase-like |2,6-dihydropseudooxynicotine hydrolase |Arthrobacter nicotinovorans [TaxId: 29320]
d1cgwa4 : (ILE115) (ASN139) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
d1hkwa2 : (SER77) (THR94) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Diaminopimelate decarboxylase LysA |Mycobacterium tuberculosis [TaxId: 1773]
d2yznc2 : (ASP115) (LYS138) [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1dmra2 : (CYS125) (ALA143) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Dimethylsulfoxide reductase (DMSO reductase) |Rhodobacter capsulatus [TaxId: 1061]
d4x00b_ : (GLY114) (ASP137) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2g0ja_ : (ASP79) (THR110) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein Smu.848 |Streptococcus mutans [TaxId: 1309]
d2jbwd_ : (ILE336) (MSE360) [view usage] : c.69.1.41 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |2,6-dihydropseudooxynicotine hydrolase-like |2,6-dihydropseudooxynicotine hydrolase |Arthrobacter nicotinovorans [TaxId: 29320]
d1h3na2 : (GLU393) (TYR417) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |Leucyl-tRNA synthetase (LeuRS) |Thermus thermophilus [TaxId: 274]
d2g0jd_ : (ASP79) (GLN111) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein Smu.848 |Streptococcus mutans [TaxId: 1309]
d2wphs_ : (HIS91) (LEU108) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w4ra1 : (PHE133) (LYS148) [view usage] : c.37.1.24 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Type II thymidine kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2mnga_ : (GLY659) (ALA675) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p13b_ : (GLU11) (ASN29) [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d3rdka_ : (PRO6) (SER22) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Paenibacillus sp. [TaxId: 324057]
d3fe2a_ : (ALA188) (GLY203) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m53a2 : (GLU386) (TYR406) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isomaltulose synthase PalI |Klebsiella sp., lx3 [TaxId: 576]
d2awua_ : (HIS384) (SER407) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4txoc_ : (ASP42) (ALA71) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Bradyrhizobium diazoefficiens [TaxId: 224911]
d1bxya_ : (THR40) (VAL58) [view usage] : d.59.1.1 |Ribosomal protein L30p/L7e |Ribosomal protein L30p/L7e |Ribosomal protein L30p/L7e |Prokaryotic ribosomal protein L30 |Thermus thermophilus [TaxId: 274]
d1hkva2 : (SER77) (THR94) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Diaminopimelate decarboxylase LysA |Mycobacterium tuberculosis [TaxId: 1773]
d1ue0a_ : (PHE359) (SER381) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |Isoleucyl-tRNA synthetase (IleRS) |Thermus thermophilus [TaxId: 274]
d1ojga_ : (LEU126) (GLY140) [view usage] : d.110.6.1 |Profilin-like |Sensory domain-like |Sensory domain of two-component sensor kinase |Fumarate sensor DcuS |Escherichia coli [TaxId: 562]
d2qu7a_ : (SER281) (ILE294) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Staphylococcus saprophyticus [TaxId: 342451]
d2edpa_ : (ARG72) (ARG93) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ev8a_ : (SER129) (ILE149) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3fema_ : (PRO48) (MET60) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xqga_ : (ALA149) (MET172) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Maspin |Human (Homo sapiens) [TaxId: 9606]
d4a34e_ : (SER10) (ALA29) [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1k5dc_ : (VAL321) (ASP338) [view usage] : c.10.1.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Rna1p (RanGAP1), N-terminal domain |Rna1p (RanGAP1), N-terminal domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1wcmg_ : (MET22) (CYS47) [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |Complete 12-subunit RNA polymerase II complex |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1s2oa1 : (ASP92) (SER108) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Sucrose-phosphatase Slr0953 |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1ue0b_ : (TYR358) (SER381) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |Isoleucyl-tRNA synthetase (IleRS) |Thermus thermophilus [TaxId: 274]
d1daxa_ : (GLU46) (GLU64) [view usage] : d.58.1.4 |Ferredoxin-like |4Fe-4S ferredoxins |Single 4Fe-4S cluster ferredoxin |Ferredoxin I |Desulfovibrio africanus [TaxId: 873]
d1u8fo2 : (TRP196) (GLY212) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Human (Homo sapiens), liver isoform [TaxId: 9606]
d3ci0j1 : (LEU41) (GLY77) [view usage] : d.24.1.5 |Pili subunits |Pili subunits |EpsJ-like |Pseudopilin GspJ |Escherichia coli [TaxId: 562]
d3wlxa_ : (SER231) (THR275) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1qf9a_ : (ASN94) (PHE113) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |UMP/CMP kinase |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d2rhba2 : (MET251) (ASP267) [view usage] : d.294.1.2 |EndoU-like |EndoU-like |Nsp15 C-terminal domain-like |Nsp15, C-terminal domain |SARS coronavirus [TaxId: 227859]
d3qk8d_ : (SER175) (ASP190) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d1jfub_ : (PRO8) (ALA36) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Membrane-anchored thioredoxin-like protein TlpA, soluble domain |Bradyrhizobium japonicum [TaxId: 375]
d3mfma2 : (THR278) (HIS299) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d1aawa_ : (THR366) (VAL382) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
d2doua_ : (PRO7) (LEU30) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3u7ba_ : (LYS194) (GLU212) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1lj8a4 : (ASN7) (PRO18) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Mannitol 2-dehydrogenase |Pseudomonas fluorescens [TaxId: 294]
d1j8fc_ : (THR63) (VAL83) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |Sirt2 histone deacetylase |Human (Homo sapiens) [TaxId: 9606]
d2cpia1 : (ARG165) (SER189) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |E3 ubiquitin protein ligase CNOT4 |Mouse (Mus musculus) [TaxId: 10090]
d1jd7a2 : (ARG64) (ASN88) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d1nawa_ : (PRO189) (GLY207) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Enterobacter cloacae [TaxId: 550]
d2cwwb2 : (THR331) (VAL352) [view usage] : c.66.1.51 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |hypothetical RNA methyltransferase |Hypothetical protein TTHA1280, middle and C-terminal domains |Thermus thermophilus [TaxId: 274]
d4pmja_ : (ILE177) (SER196) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Rhizobium meliloti [TaxId: 266834]
d1p3db1 : (LYS88) (GLN106) [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
d1g4xa_ : (THR366) (VAL382) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
d4txoa_ : (ASP42) (ALA71) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Bradyrhizobium diazoefficiens [TaxId: 224911]
d1evka2 : (ASN268) (LYS294) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Threonyl-tRNA synthetase (ThrRS) |Escherichia coli [TaxId: 562]
d1kohc2 : (SER167) (SER193) [view usage] : d.58.7.2 |Ferredoxin-like |RNA-binding domain, RBD |Non-canonical RBD domain |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d4txvc_ : (ASP42) (ALA71) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Bradyrhizobium diazoefficiens [TaxId: 224911]
d1w85c_ : (SER42) (GLY80) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |Pyruvate dehydrogenase E1-alpha, PdhA |Bacillus stearothermophilus [TaxId: 1422]
d3qz6a_ : (LYS4) (ASN19) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Desulfitobacterium hafniense [TaxId: 272564]
d1nkta4 : (HIS465) (THR485) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Translocation ATPase SecA, nucleotide-binding domains |Mycobacterium tuberculosis [TaxId: 1773]
d1fsaa_ : (GLY122) (ARG140) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1l2wf_ : (GLU59) (TRP80) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |YopE chaperone SycE |Yersinia pestis [TaxId: 632]
d1wdaa3 : (ARG374) (GLY395) [view usage] : d.126.1.5 |Pentein, beta/alpha-propeller |Pentein |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1acoa2 : (GLY182) (LYS198) [view usage] : c.83.1.1 |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase A, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d6cgta4 : (THR114) (ASN139) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
d1miua5 : (HIS2975) (GLY2995) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |OB-fold domains of BRCA2 |Mouse (Mus musculus) [TaxId: 10090]
d1clqa1 : (MET65) (GLY84) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d4je1a_ : (THR62) (VAL81) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2fug71 : (SER4) (LYS33) [view usage] : d.82.2.2 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Nqo15-like |NADH-quinone oxidoreductase subunit 15, Nqo15 |Thermus thermophilus [TaxId: 274]
d1r6zz1 : (THR677) (PHE691) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |Argonaute 2 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1m1lc_ : (PRO137) (SER157) [view usage] : d.260.1.1 |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3u7bb_ : (LEU5) (THR22) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1yrga_ : (ASP320) (ASP338) [view usage] : c.10.1.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Rna1p (RanGAP1), N-terminal domain |Rna1p (RanGAP1), N-terminal domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d3ls6a_ : (THR11) (ASP33) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |automated matches |Salmonella typhimurium [TaxId: 90371]
d1ad3a_ : (ASN286) (ASP309) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1wk9a_ : (ARG314) (TYR337) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |automated matches |Thermus thermophilus [TaxId: 274]
d1wxwb2 : (THR331) (VAL352) [view usage] : c.66.1.51 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |hypothetical RNA methyltransferase |Hypothetical protein TTHA1280, middle and C-terminal domains |Thermus thermophilus [TaxId: 274]
d2v90a_ : (HIS310) (GLU332) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wkva1 : (SER202) (ASN223) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |O-acetylserine sulfhydrylase (Cysteine synthase) |Aeropyrum pernix [TaxId: 56636]
d2edva_ : (SER66) (SER90) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wpms_ : (HIS91) (LEU108) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p12d_ : (GLU11) (ASN29) [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d3lqua_ : (THR11) (ASP33) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |automated matches |Salmonella typhimurium [TaxId: 90371]
d1s2ma2 : (ASN388) (ALA408) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Putative ATP-dependent RNA helicase DHH1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1og6a_ : (GLY194) (ASP220) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Hypothetical oxidoreductase YdhF |Escherichia coli [TaxId: 562]
d1p85g_ : (ILE121) (GLU140) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d2wpis_ : (HIS91) (LEU108) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor IXa, protease domain |Human (Homo sapiens) [TaxId: 9606]
d2q5rb_ : (GLY61) (ALA79) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1pp0b_ : (ASP1042) (ILE1068) [view usage] : d.103.1.1 |CytB endotoxin-like |CytB endotoxin-like |CytB endotoxin-like |Volvatoxin A2 |Volvariella volvacea, different isoforms [TaxId: 36659]
d1pvwa_ : (ASN2) (SER22) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |Methanocaldococcus jannaschii [TaxId: 2190]
d1cdga4 : (ILE115) (ASN139) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
d3zfeb_ : (VAL91) (SER104) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1z8la2 : (GLY298) (HIS347) [view usage] : c.8.4.1 |The "swivelling" beta/beta/alpha domain |PA domain |PA domain |Glutamate carboxypeptidase II |Human (Homo sapiens) [TaxId: 9606]
d1rf4a_ : (ASN194) (ASP210) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3fvtf_ : (VAL117) (SER127) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |automated matches |Bacillus pumilus [TaxId: 1408]
d1ur3m_ : (GLY194) (CYS211) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Hypothetical oxidoreductase YdhF |Escherichia coli [TaxId: 562]
d4pwza1 : (GLY55) (ASP72) [view usage] : c.51.2.0 |Anticodon-binding domain-like |TolB, N-terminal domain |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d1u6zb1 : (ALA480) (THR508) [view usage] : a.211.1.5 |HD-domain/PDEase-like |HD-domain/PDEase-like |Ppx associated domain |Exopolyphosphatase Ppx C-terminal domain |Escherichia coli [TaxId: 562]
d1r6zp1 : (THR677) (PHE691) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |Argonaute 2 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1dela_ : (ASP179) (ARG197) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxynucleoside monophosphate kinase |Bacteriophage T4 [TaxId: 10665]
d2koha_ : (ASN655) (ILE684) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1zorb_ : (VAL306) (SER320) [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2hgj21 : (THR40) (GLU60) [view usage] : d.59.1.1 |Ribosomal protein L30p/L7e |Ribosomal protein L30p/L7e |Ribosomal protein L30p/L7e |Prokaryotic ribosomal protein L30 |Thermus thermophilus [TaxId: 274]
d1fwxd2 : (ASN348) (ILE364) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
d3dvaa_ : (SER42) (GLY80) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |automated matches |Bacillus stearothermophilus [TaxId: 1422]
d1asta_ : (SER145) (GLN168) [view usage] : d.92.1.8 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Astacin |Astacin |European fresh water crayfish (Astacus astacus) [TaxId: 6715]
d3gsna2 : (CYS183) (SER200) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qj9d_ : (SER83) (ARG103) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |BMP receptor Ia ectodomain |Human (Homo sapiens) [TaxId: 9606]
d2uzcc_ : (THR62) (LEU81) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fywc_ : (TYR206) (PRO223) [view usage] : c.135.1.1 |NIF3 (NGG1p interacting factor 3)-like |NIF3 (NGG1p interacting factor 3)-like |NIF3 (NGG1p interacting factor 3)-like |Hypothetical protein SP1609 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4isxb_ : (LYS4) (ASN16) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d1bw9b1 : (THR608) (ALA623) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
d2fuca1 : (GLU103) (GLY126) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Phosphomannomutase 1 |Human (Homo sapiens) [TaxId: 9606]
d3hmca_ : (MET129) (PRO146) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3e10b_ : (ALA63) (LEU76) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
d2qmsa_ : (LEU505) (VAL530) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 7 |Human (Homo sapiens) [TaxId: 9606]
d1z7mb_ : (THR16) (MET43) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |ATP phosphoribosyltransferase regulatory subunit HisZ |Lactococcus lactis [TaxId: 1358]
d4bofb_ : (THR189) (VAL210) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d3j3bk_ : (ASP49) (LYS70) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Homo sapiens [TaxId: 9606]
d1vw4k_ : (MET98) (LEU113) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Saccharomyces cerevisiae [TaxId: 4932]
d1i16a_ : (ARG95) (SER118) [view usage] : b.36.1.2 |PDZ domain-like |PDZ domain-like |Interleukin 16 |Interleukin 16 |Human (Homo sapiens) [TaxId: 9606]
d1wk8b_ : (TYR358) (TYR382) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |Isoleucyl-tRNA synthetase (IleRS) |Thermus thermophilus [TaxId: 274]
d2ukda_ : (GLU95) (PHE113) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |UMP/CMP kinase |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d4bofc_ : (GLU183) (VAL210) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d2uzcb_ : (THR62) (LEU81) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ipna_ : (LEU238) (ASP257) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
d4mqqb_ : (TYR236) (GLU255) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3sajc_ : (ASN223) (VAL238) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1j9za3 : (GLU577) (PHE595) [view usage] : c.25.1.4 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |NADPH-cytochrome p450 reductase-like |NADPH-cytochrome p450 reductase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1eiyb4 : (GLU759) (ARG780) [view usage] : d.58.13.1 |Ferredoxin-like |Anticodon-binding domain of PheRS |Anticodon-binding domain of PheRS |Phenylalanyl-tRNA synthetase |Thermus thermophilus [TaxId: 274]
d2a8tb_ : (SER22) (PRO43) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1dbvo2 : (ASP192) (GLY209) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
d2qk4a1 : (GLY84) (PHE94) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cexa_ : (ASP49) (ALA66) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sialic acid-binding protein SiaP |Haemophilus influenzae [TaxId: 727]
d2eega_ : (THR68) (PRO91) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ls6b_ : (THR11) (ASP33) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |automated matches |Salmonella typhimurium [TaxId: 90371]
d2ek1d_ : (SER926) (GLY951) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1odtc_ : (VAL117) (THR126) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |Cephalosporin C deacetylase |Bacillus subtilis [TaxId: 1423]
d1pvya_ : (ASN3) (SER22) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |Methanocaldococcus jannaschii [TaxId: 2190]
d4ffva2 : (TRP564) (PHE579) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2i1nb_ : (VAL195) (ARG217) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yzrb_ : (VAL47) (MET60) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1uina_ : (ASN133) (SER155) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Threonine synthase |Thermus thermophilus [TaxId: 274]
d1udza_ : (TYR358) (SER381) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |Isoleucyl-tRNA synthetase (IleRS) |Thermus thermophilus [TaxId: 274]
d1e60a2 : (CYS125) (ALA143) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Dimethylsulfoxide reductase (DMSO reductase) |Rhodobacter capsulatus [TaxId: 1061]
d1l6oc_ : (ASP318) (VAL338) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Segment polarity protein dishevelled homolog Dvl-2 |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3qi0a_ : (PRO98) (ASN112) [view usage] : b.69.5.2 |7-bladed beta-propeller |RCC1/BLIP-II |beta-lactamase inhibitor protein-II, BLIP-II |automated matches |Streptomyces exfoliatus [TaxId: 1905]
d4lf2e1 : (LYS13) (ILE29) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 258594]
d2ynwb_ : (SER139) (ASP174) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1pqna_ : (TYR46) (LEU60) [view usage] : c.47.1.8 |Thioredoxin fold |Thioredoxin-like |spliceosomal protein U5-15Kd |spliceosomal protein U5-15Kd |Human (Homo sapiens) [TaxId: 9606]
d2dpwa1 : (PRO120) (ARG139) [view usage] : c.68.1.19 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |TTHA0179-like |Uncharacterized protein TTHA0179 |Thermus thermophilus [TaxId: 274]
d1b9ia_ : (GLU239) (GLN279) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) |Amycolatopsis mediterranei [TaxId: 33910]
d1h9ra2 : (ALA238) (ASN252) [view usage] : b.40.6.2 |OB-fold |MOP-like |BiMOP, duplicated molybdate-binding domain |C-terminal domain of molybdate-dependent transcriptional regulator ModE |Escherichia coli [TaxId: 562]
d4adua_ : (PRO52) (SER64) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Plasmodium berghei [TaxId: 5821]
d1a7ta_ : (GLN105) (ASP125) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
d1fhsa_ : (SER76) (LEU97) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
d1e3da_ : (THR93) (GLY112) [view usage] : e.19.1.1 |HydA/Nqo6-like |HydA/Nqo6-like |Nickel-iron hydrogenase, small subunit |Nickel-iron hydrogenase, small subunit |Desulfovibrio desulfuricans [TaxId: 876]
d4mh4a_ : (CYS130) (ILE146) [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2fb9a2 : (ASP118) (LYS141) [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Thermus caldophilus [TaxId: 272]
d2dita1 : (PRO74) (ALA98) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |HIV Tat-specific factor 1 |Human (Homo sapiens) [TaxId: 9606]
d1yb3a1 : (SER87) (TYR104) [view usage] : d.296.1.2 |YktB/PF0168-like |YktB/PF0168-like |PF0168-like |Hypothetical protein PF0168 |Pyrococcus furiosus [TaxId: 2261]
d1m5za_ : (ASP83) (ASN105) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Glutamate receptor interacting protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2dlua_ : (THR75) (ASP97) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2csja1 : (LEU81) (PRO103) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Tight junction protein ZO-2, Tjp2 |Mouse (Mus musculus) [TaxId: 10090]
d1b0pa4 : (SER528) (ASP545) [view usage] : c.64.1.1 |Pyruvate-ferredoxin oxidoreductase, PFOR, domain III |Pyruvate-ferredoxin oxidoreductase, PFOR, domain III |Pyruvate-ferredoxin oxidoreductase, PFOR, domain III |Pyruvate-ferredoxin oxidoreductase, PFOR, domain III |Desulfovibrio africanus [TaxId: 873]
d1n7fa_ : (LEU732) (GLN753) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Glutamate receptor-interacting protein 1, GRIP1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1fwxb2 : (ASN348) (ILE364) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
d1ogca_ : (ASN8) (ALA27) [view usage] : c.133.1.1 |RbsD-like |RbsD-like |RbsD-like |Ribose transport protein RbsD |Bacillus subtilis [TaxId: 1423]
d3n9sa_ : (GLY5) (ASN23) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Helicobacter pylori [TaxId: 290847]
d3mizb_ : (ARG282) (ALA295) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhizobium etli [TaxId: 347834]
d1jfua_ : (ASP7) (ALA36) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Membrane-anchored thioredoxin-like protein TlpA, soluble domain |Bradyrhizobium japonicum [TaxId: 375]
d1yzhb_ : (THR191) (ALA209) [view usage] : c.66.1.53 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TrmB-like |tRNA (guanine-N(7)-)-methyltransferase TrmB |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1pvyb_ : (ASN3) (SER22) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |Methanocaldococcus jannaschii [TaxId: 2190]
d1yl3t1 : (GLU12) (ALA27) [view usage] : d.12.1.1 |Ribosomal proteins S24e, L23 and L15e |Ribosomal proteins S24e, L23 and L15e |L23p |Ribosomal protein L23 |Thermus thermophilus [TaxId: 274]
d3nyia_ : (THR44) (LEU64) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium ventriosum [TaxId: 411463]
d1ukea_ : (ASN94) (PHE113) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |UMP/CMP kinase |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d4pgga2 : (LEU230) (GLY247) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Sorghum (Sorghum bicolor) [TaxId: 4558]
d4a34a_ : (SER10) (ALA29) [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1zyba2 : (GLU84) (ALA101) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Probable transcription regulator BT4300, N-terminal domain |Bacteroides thetaiotaomicron [TaxId: 818]
d1wk8a_ : (TYR358) (TYR382) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |Isoleucyl-tRNA synthetase (IleRS) |Thermus thermophilus [TaxId: 274]
d1dt9a1 : (LEU212) (GLY228) [view usage] : c.55.4.2 |Ribonuclease H-like motif |Translational machinery components |ERF1/Dom34 middle domain-like |Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1 |Human (Homo sapiens) [TaxId: 9606]
d2ebba_ : (THR6) (ALA23) [view usage] : d.74.1.0 |DCoH-like |PCD-like |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d3rl7d_ : (THR288) (ARG310) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cska_ : (ARG121) (ARG134) [view usage] : d.189.1.0 |PX domain |PX domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hvea_ : (ASN82) (SER122) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Human (Homo sapiens), NDKA [TaxId: 9606]
d1yzha1 : (THR191) (GLU208) [view usage] : c.66.1.53 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TrmB-like |tRNA (guanine-N(7)-)-methyltransferase TrmB |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1xz9a1 : (GLU77) (GLY98) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Afadin |Human (Homo sapiens) [TaxId: 9606]
d3hfav_ : (GLY460) (PRO484) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2pzmb_ : (PRO175) (ASP193) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
d1wnya_ : (TYR358) (SER381) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |automated matches |Thermus thermophilus [TaxId: 274]
d3e10a_ : (ALA63) (LEU76) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
d1w25a3 : (ASN299) (ILE326) [view usage] : d.58.29.2 |Ferredoxin-like |Nucleotide cyclase |GGDEF domain |Response regulator PleD, C-terminal domain |Caulobacter crescentus [TaxId: 155892]
d1l2na_ : (THR77) (ILE96) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-1 (smt3 homologue) |Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]
d3zgoc_ : (LEU64) (VAL83) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1dj9a_ : (GLY218) (PHE234) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) |Escherichia coli [TaxId: 562]
d3reoa2 : (PRO236) (GLY252) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |automated matches |Clarkia breweri [TaxId: 36903]
d3p12a_ : (GLU11) (ASN29) [view usage] : c.133.1.0 |RbsD-like |RbsD-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d1zvva2 : (THR277) (VAL290) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Glucose-resistance amylase regulator CcpA, C-terminal domain |Bacillus megaterium [TaxId: 1404]
d2g8la1 : (GLN242) (LEU260) [view usage] : e.50.1.1 |AF1104-like |AF1104-like |AF1104-like |Hypothetical protein PH1575 |Pyrococcus horikoshii [TaxId: 53953]
d1o61a_ : (HIS311) (LEU331) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Aminotransferase homolog WlaK (PglE, Cj1121c) |Campylobacter jejuni [TaxId: 197]
d4itua_ : (ALA128) (PHE141) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
d1h9sa2 : (ALA238) (ASN252) [view usage] : b.40.6.2 |OB-fold |MOP-like |BiMOP, duplicated molybdate-binding domain |C-terminal domain of molybdate-dependent transcriptional regulator ModE |Escherichia coli [TaxId: 562]
d1p31b1 : (LYS88) (GLN106) [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
d1srza_ : (LYS101) (GLY115) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |GABA-B receptor 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3niwa_ : (VAL92) (TYR110) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d1bxra6 : (ARG677) (THR696) [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains |Escherichia coli [TaxId: 562]
d3nj3a_ : (SER21) (ALA36) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermotoga petrophila [TaxId: 390874]
d3o07b_ : (ALA49) (MET60) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3hbja_ : (GLY262) (PHE280) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
d3pj9d_ : (GLY79) (SER119) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Campylobacter jejuni [TaxId: 192222]
d1ogpa1 : (ASN366) (LEU388) [view usage] : b.1.18.6 |Immunoglobulin-like beta-sandwich |E set domains |Molybdenum-containing oxidoreductases-like dimerisation domain |Sulfite oxidase, C-terminal domain |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3o46a_ : (PRO198) (LYS215) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1buhb_ : (SER39) (PRO72) [view usage] : d.97.1.1 |Cell cycle regulatory proteins |Cell cycle regulatory proteins |Cell cycle regulatory proteins |CksHs1 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, b.82, c.67, c.69, b.81, c.81, c.94, d.68, c.2, d.58, b.69, i.1, c.68, c.108, c.79, c.82, b.47, d.157, c.66,
d.92, c.77, c.93, c.14, c.135, a.211, c.72, b.40, c.37, c.36, d.104, c.47, c.55, d.153, b.121, c.87, d.81, c.31, e.7, b.1,
d.126, d.110, c.8, c.25, c.51, c.133, d.142, e.1, b.34, d.90, c.30, d.15, d.74, d.93, e.19, i.8, b.51, d.227, d.113, d.82,
c.119, c.83, c.5, e.50, b.36, g.18, d.24, d.198, d.64, g.7, d.12, d.260, d.97, d.103, d.296, d.189, d.294, c.64, d.115, d.59