Tableau information
Concept source: d3lxhb_ amino acid (a.a.) range (GLY292)(SER311)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY292) (PHE300) H1
(PHE300) (SER311) E2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -61.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3m6sc_ : (PRO65) (SER74) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d4mbzj_ : (LYS184) (ASP199) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d2w7ub_ : (PRO151) (ASN160) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d2yrxa3 : (THR386) (GLY405) [view usage] : b.84.2.0 |Barrel-sandwich hybrid |Rudiment single hybrid motif |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d4kooa_ : (LYS169) (VAL181) [view usage] : d.18.1.2 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |Plant transcriptional regulator PBF-2 |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2zpoa_ : (THR2) (PRO15) [view usage] : d.5.1.0 |RNase A-like |RNase A-like |automated matches |automated matches |Chelonia mydas [TaxId: 8469]
d2lx9a_ : (ARG61) (SER74) [view usage] : b.34.1.2 |SH3-like barrel |C-terminal domain of transcriptional repressors |FeoA-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4c9zb_ : (ILE247) (ASP260) [view usage] : b.8.1.2 |TRAF domain-like |TRAF domain-like |SIAH, seven in absentia homolog |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bofa_ : (GLY398) (GLU407) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d2hp6b_ : (PHE153) (SER162) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d1mt0a_ : (ASN539) (GLN550) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Haemolysin B ATP-binding protein |Escherichia coli [TaxId: 562]
d2f1la1 : (TYR102) (ASP113) [view usage] : b.41.1.4 |PRC-barrel domain |PRC-barrel domain |RimM C-terminal domain-like |16S rRNA processing protein RimM, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
d3ph5b_ : (ASP44) (GLU61) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d2owna2 : (PRO192) (VAL202) [view usage] : d.38.1.8 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |Acyl-ACP thioesterase-like |Putative oleoyl-ACP thioesterase LP0708 |Lactobacillus plantarum [TaxId: 1590]
d1qo0b_ : (GLU243) (ALA254) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Amide receptor/negative regulator of the amidase operon (AmiC) |Pseudomonas aeruginosa [TaxId: 287]
d4qwoa_ : (ASN44) (SER73) [view usage] : d.110.1.0 |Profilin-like |Profilin (actin-binding protein) |automated matches |automated matches |Monkeypox virus [TaxId: 619591]
d4hhpa_ : (SER156) (TYR167) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d1czka_ : (TYR70) (GLY80) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d1ezvb2 : (SER294) (SER315) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3m6sa_ : (PRO65) (SER74) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d3m6si_ : (PRO65) (SER74) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d2aaza_ : (GLU20) (PRO38) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Fungus (Filobasidiella neoformans) [TaxId: 5207]
d2akab1 : (ASP8) (GLY39) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Dynamin G domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3t5pb_ : (GLY231) (LYS256) [view usage] : e.52.1.0 |NAD kinase/diacylglycerol kinase-like |NAD kinase/diacylglycerol kinase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 260799]
d1hx6b1 : (ALA13) (GLN40) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d1qxna_ : (GLY116) (HIS134) [view usage] : c.46.1.3 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Single-domain sulfurtransferase |Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) |Wolinella succinogenes [TaxId: 844]
d2d4ec_ : (TRP12) (HIS29) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Thermus thermophilus [TaxId: 300852]
d1amka_ : (THR155) (TYR166) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1ni4b1 : (ASN172) (PRO183) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |E1-beta subunit of pyruvate dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d1g2sa_ : (SER4) (SER33) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Eotaxin-3 |Human (Homo sapiens) [TaxId: 9606]
d1chua1 : (SER484) (LEU517) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |L-aspartate oxidase |Escherichia coli [TaxId: 562]
d2xw9a_ : (ALA9) (LEU20) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Factor D |Human (Homo sapiens) [TaxId: 9606]
d4i3xc_ : (LYS99) (GLY125) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1gw7c_ : (LEU3015) (GLN3040) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d1nvjb_ : (HIS103) (ARG127) [view usage] : d.41.5.1 |alpha/beta-Hammerhead |Molybdopterin synthase subunit MoaE |Molybdopterin synthase subunit MoaE |Molybdopterin synthase subunit MoaE |Escherichia coli [TaxId: 562]
d3fdoa_ : (PRO95) (LEU109) [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fzab1 : (GLU363) (THR377) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), beta [TaxId: 9606]
d4bqfb_ : (ASP184) (ASP198) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1faxa_ : (ASP24) (GLU36) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor Xa, protease domain |Human (Homo sapiens) [TaxId: 9606]
d1wscb_ : (SER106) (LEU120) [view usage] : d.309.1.1 |AMMECR1-like |AMMECR1-like |AMMECR1-like |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d1k5ba_ : (TYR6) (LYS17) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d2wzr3_ : (LEU44) (ASP56) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Foot-and-mouth disease virus [TaxId: 12122]
d1nzca_ : (ALA147) (ASN158) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Streptococcus suis [TaxId: 1307]
d3exeb1 : (ASN172) (PRO184) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1twye_ : (SER225) (TYR244) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ABC transporter, periplasmic substrate-binding protein VCA0807 |Vibrio cholerae [TaxId: 666]
d2nqmb2 : (SER9) (PRO31) [view usage] : b.103.1.1 |MoeA N-terminal region -like |MoeA N-terminal region -like |MoeA N-terminal region -like |Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |Escherichia coli [TaxId: 562]
d2f2fb1 : (SER186) (GLY198) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |Cytolethal distending toxin subunit B |Actinobacillus actinomycetemcomitans [TaxId: 714]
d3jzoa_ : (PRO95) (LEU109) [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4dhea_ : (MET1) (HIS16) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1dgja2 : (LEU22) (LEU76) [view usage] : d.15.4.2 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin domains from multidomain proteins |Aldehyde oxidoreductase, N-terminal domain |Desulfovibrio desulfuricans [TaxId: 876]
d1ymra_ : (THR3) (SER16) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Cow (Bos taurus) [TaxId: 9913]
d1o6ua3 : (PRO77) (GLY90) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Supernatant protein factor (SPF), middle domain |Human (Homo sapiens) [TaxId: 9606]
d3pftb_ : (HIS80) (ASP104) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Mycobacterium goodii [TaxId: 134601]
d2hbwa1 : (LEU70) (THR80) [view usage] : b.34.11.0 |SH3-like barrel |Prokaryotic SH3-related domain |automated matches |automated matches |Anabaena variabilis [TaxId: 240292]
d2ixga_ : (HIS551) (GLY562) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1zba3_ : (LEU45) (PHE54) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Foot-and-mouth disease virus [TaxId: 12110]
d1g7ra3 : (ASP329) (ASP349) [view usage] : c.20.1.1 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1uwba2 : (GLU297) (TYR318) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1sh0a_ : (GLN408) (GLY420) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Norwalk virus [TaxId: 11983]
d2radb_ : (THR39) (THR55) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d2bkaa1 : (GLU59) (ASP71) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |TAT-interacting protein TIP30 |Human (Homo sapiens) [TaxId: 9606]
d4g63a_ : (ASP23) (ASN32) [view usage] : c.108.1.23 |HAD-like |HAD-like |5' nucleotidase-like |Cytosolic IMP-GMP specific 5'-nucleotidase |Legionella pneumophila [TaxId: 272624]
d1cjdc1 : (ASN17) (GLN40) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d2olja_ : (LEU72) (PHE83) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d2fb1a2 : (ASN3) (TYR12) [view usage] : d.113.1.6 |Nudix |Nudix |BT0354 N-terminal domain-like |Hypothetical protein BT0354, N-terminal domain |Bacteroides thetaiotaomicron [TaxId: 818]
d1jdwa_ : (GLY404) (ARG413) [view usage] : d.126.1.2 |Pentein, beta/alpha-propeller |Pentein |Amidinotransferase |L-arginine: glycine amidinotransferase |Human (Homo sapiens) [TaxId: 9606]
d4jdwa_ : (GLY404) (ARG413) [view usage] : d.126.1.2 |Pentein, beta/alpha-propeller |Pentein |Amidinotransferase |L-arginine: glycine amidinotransferase |Human (Homo sapiens) [TaxId: 9606]
d3rsda_ : (THR3) (SER16) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Cow (Bos taurus) [TaxId: 9913]
d2oukb_ : (LEU72) (PHE83) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1h9oa_ : (ASP8) (SER16) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Phosphatidylinositol 3-kinase, p85-alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d3m6sg_ : (PRO65) (SER74) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1regy_ : (LYS109) (TYR118) [view usage] : d.58.27.1 |Ferredoxin-like |Translational regulator protein regA |Translational regulator protein regA |Translational regulator protein regA |Bacteriophage T4 [TaxId: 10665]
d3b5ra_ : (PRO892) (HIS917) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
d1cjdb1 : (ALA13) (GLN40) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d3eqzb_ : (HIS34) (LYS45) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Colwellia psychrerythraea [TaxId: 167879]
d1kska4 : (GLY115) (GLU137) [view usage] : d.265.1.3 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase RsuA/RluD |Ribosomal small subunit pseudouridine 516 synthase RsuA |Escherichia coli [TaxId: 562]
d1i1la_ : (ALA134) (VAL143) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |Branched-chain aminoacid aminotransferase |Escherichia coli [TaxId: 562]
d3lxfa_ : (ASP92) (PRO103) [view usage] : d.15.4.0 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
d1visa2 : (GLU181) (TYR192) [view usage] : d.58.26.3 |Ferredoxin-like |GHMP Kinase, C-terminal domain |Mevalonate kinase |Mevalonate kinase |Methanococcus jannaschii [TaxId: 2190]
d1bcma1 : (THR481) (GLU493) [view usage] : b.48.1.1 |mu transposase, C-terminal domain |mu transposase, C-terminal domain |mu transposase, C-terminal domain |mu transposase, C-terminal domain |Bacteriophage Mu [TaxId: 10677]
d1xiza_ : (ASN-1) (ARG8) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Putative PTS protein STM3784 |Salmonella typhimurium [TaxId: 90371]
d3tjua_ : (PRO24) (LEU36) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qq4f_ : (VAL3) (ASN21) [view usage] : d.224.1.0 |SufE/NifU |SufE/NifU |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
d1hb5b_ : (ALA13) (GLN40) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d1re3b1 : (GLU363) (THR377) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Human (Homo sapiens), beta [TaxId: 9606]
d1j5oa2 : (ALA299) (TYR318) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1z3ix2 : (SER364) (ARG389) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Rad54-like, Rad54L |Zebrafish (Danio rerio) [TaxId: 7955]
d1rraa_ : (SER3) (GLU16) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1olma3 : (PRO77) (GLY90) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Supernatant protein factor (SPF), middle domain |Human (Homo sapiens) [TaxId: 9606]
d2e0oa_ : (SER3) (ASP16) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ckfa1 : (ARG23) (GLY42) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Sphingomonas sp. [TaxId: 279135]
d1piv3_ : (MET44) (LEU55) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 3, strain Sabin [TaxId: 12086]
d4hmzb_ : (SER90) (PRO100) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Streptomyces bikiniensis [TaxId: 1896]
d1czra_ : (TYR70) (GLY80) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d4drha_ : (SER13) (THR26) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4azma_ : (THR3) (LEU13) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2d8na_ : (PHE83) (LYS119) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jdxa_ : (GLY404) (ARG413) [view usage] : d.126.1.2 |Pentein, beta/alpha-propeller |Pentein |Amidinotransferase |L-arginine: glycine amidinotransferase |Human (Homo sapiens) [TaxId: 9606]
d1hqna1 : (ARG16) (GLN40) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d1eo1a_ : (SER96) (ARG113) [view usage] : c.55.5.1 |Ribonuclease H-like motif |Nitrogenase accessory factor-like |MTH1175-like |Hypothetical protein MTH1175 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2hgjk1 : (ARG57) (VAL81) [view usage] : d.99.1.1 |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Ribosomal protein L9 C-domain |Thermus thermophilus [TaxId: 274]
d1gv7a_ : (ARG5) (LYS17) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d3hjwa1 : (GLU97) (VAL114) [view usage] : d.265.1.0 |Pseudouridine synthase |Pseudouridine synthase |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d3lfgb_ : (SER46) (GLN57) [view usage] : d.94.1.0 |HPr-like |HPr-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
d4bofb_ : (GLY398) (GLU407) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d1gera2 : (ILE148) (SER157) [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Glutathione reductase |Escherichia coli [TaxId: 562]
d1lk9b_ : (ASN194) (PRO205) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Alliinase |Garlic (Allium sativum) [TaxId: 4682]
d1thja_ : (ASP6) (THR17) [view usage] : b.81.1.5 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |gamma-carbonic anhydrase-like |gamma-carbonic anhydrase |Methanosarcina thermophila [TaxId: 2210]
d3govb_ : (LYS457) (HIS468) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bofc_ : (GLY398) (GLU407) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d1hqnc1 : (LEU15) (GLN40) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d1ymme1 : (SER101) (VAL117) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d3u5gb_ : (ALA12) (SER30) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d3m7ua_ : (ARG140) (THR149) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Lysobacter enzymogenes [TaxId: 69]
d4ahma_ : (SER4) (LYS17) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d2rada1 : (ALA43) (THR55) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d1lsha2 : (PRO199) (PRO222) [view usage] : f.7.1.1 |Lipovitellin-phosvitin complex; beta-sheet shell regions |Lipovitellin-phosvitin complex; beta-sheet shell regions |Lipovitellin-phosvitin complex; beta-sheet shell regions |Lipovitellin-phosvitin complex; beta-sheet shell regions |Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]
d2axto1 : (ALA209) (THR219) [view usage] : f.4.1.4 |Transmembrane beta-barrels |OMPA-like |PsbO-like |Manganese-stabilising protein, PsbO |Thermosynechococcus elongatus [TaxId: 146786]
d3o5ga_ : (ALA14) (SER27) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hbza_ : (ARG59) (PHE68) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Micrococcus lysodeikticus [TaxId: 1270]
d1kp9a_ : (GLU256) (LYS287) [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA1 |Mycobacterium tuberculosis [TaxId: 1773]
d2vjxb2 : (LYS847) (ILE859) [view usage] : b.1.4.0 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d1a4yb_ : (ASN3) (LYS17) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d1kf6a1 : (THR500) (ASP536) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Fumarate reductase |Escherichia coli [TaxId: 562]
d2ws93_ : (PHE43) (PHE53) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Equine rhinitis a virus [TaxId: 47000]
d1czla_ : (TYR70) (GLY80) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Synechococcus elongatus PCC 7942 [TaxId: 1140]
d1zw7a_ : (THR22) (LEU71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin |Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]
d4qwob_ : (ASN44) (SER73) [view usage] : d.110.1.0 |Profilin-like |Profilin (actin-binding protein) |automated matches |automated matches |Monkeypox virus [TaxId: 619591]
d1g7sa3 : (ASP329) (ASP349) [view usage] : c.20.1.1 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Initiation factor IF2/eIF5b, domain 3 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1b6va_ : (ALA4) (SER16) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Hybrid between ribonuclease A and seminal ribonuclease |Cow (Bos taurus) [TaxId: 9913]
d2y28c_ : (TYR144) (HIS154) [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |AmpD protein |Citrobacter freundii [TaxId: 546]
d1w26a3 : (ASP134) (GLU153) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Trigger factor PPIase domain |Escherichia coli [TaxId: 562]
d1qq4a_ : (ARG140) (THR149) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d1rwsa_ : (VAL25) (ILE63) [view usage] : d.15.3.2 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |ThiS |Hypothetical protein PF1061 |Pyrococcus furiosus [TaxId: 2261]
d1r27b_ : (ASN451) (HIS462) [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]
d1qnda_ : (ALA76) (GLY103) [view usage] : d.106.1.1 |SCP-like |SCP-like |Sterol carrier protein, SCP |Sterol carrier protein 2 (SCP2) |Human (Homo sapiens) [TaxId: 9606]
d1gesa2 : (ILE148) (SER157) [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Glutathione reductase |Escherichia coli [TaxId: 562]
d2cara1 : (GLY150) (ASP158) [view usage] : c.51.4.1 |Anticodon-binding domain-like |ITPase-like |ITPase (Ham1) |Inosine triphosphate pyrophosphatase, ITPase |Human (Homo sapiens) [TaxId: 9606]
d1comb_ : (SER66) (GLN77) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Bacillus subtilis [TaxId: 1423]
d4fl0a_ : (SER252) (PHE282) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3b55a_ : (ASN38) (THR55) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d1kkha2 : (GLU183) (TYR197) [view usage] : d.58.26.3 |Ferredoxin-like |GHMP Kinase, C-terminal domain |Mevalonate kinase |Mevalonate kinase |Methanococcus jannaschii [TaxId: 2190]
d1f3la_ : (MET388) (GLU402) [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Arginine methyltransferase, HMT1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3tsrb_ : (SER4) (ASP17) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4i3ta_ : (SER98) (GLY125) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d4nr3b_ : (GLU61) (THR73) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4txob_ : (GLY93) (ASP107) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bradyrhizobium diazoefficiens [TaxId: 224911]
d1hu9a2 : (ASP48) (THR66) [view usage] : b.12.1.1 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipoxigenase N-terminal domain |Plant lipoxigenase |Soybean (Glycine max), isozyme L3 [TaxId: 3847]
d2a0ja_ : (LEU3) (ASP16) [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
d4fvva2 : (TYR1266) (PRO1281) [view usage] : b.42.4.0 |beta-Trefoil |STI-like |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d1jkua_ : (GLU107) (ALA128) [view usage] : a.25.1.3 |Ferritin-like |Ferritin-like |Manganese catalase (T-catalase) |Manganese catalase (T-catalase) |Lactobacillus plantarum [TaxId: 1590]
d2fyic_ : (ASP155) (PRO162) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |LysR-type regulatory protein Cbl |Escherichia coli [TaxId: 562]
d1u8rh3 : (PRO218) (GLU228) [view usage] : b.34.1.2 |SH3-like barrel |C-terminal domain of transcriptional repressors |FeoA-like |Iron-dependent regulator IdeR |Mycobacterium tuberculosis [TaxId: 1773]
d2g5xa_ : (LYS38) (LEU52) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Lychnis chalcedonica [TaxId: 39855]
d3ql1a_ : (THR3) (SER16) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Cow (Bos taurus) [TaxId: 9913]
d1bioa_ : (ALA24) (LEU35) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Factor D |Human (Homo sapiens) [TaxId: 9606]
d1gw7b_ : (LEU2015) (GLN2040) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d1wsta1 : (GLY223) (PHE253) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Multiple substrate aminotransferase, MSAT |Thermococcus profundus [TaxId: 49899]
d3vx4d_ : (ASP596) (PRO608) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1w8xe_ : (THR8) (GLN40) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
d4gh4c_ : (LEU44) (PHE54) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Foot-and-mouth disease virus - type a [TaxId: 12111]
d3wu2a_ : (ASN267) (HIS304) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |automated matches |Thermosynechococcus vulcanus [TaxId: 32053]
d4d9qa_ : (ALA24) (VAL35) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Macaca mulatta [TaxId: 9541]
d1rnfa_ : (MET0) (GLU16) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease 4 |Human (Homo sapiens) [TaxId: 9606]
d1e21a_ : (ALA7) (ASP16) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Human (Homo sapiens), des1-7 [TaxId: 9606]
d1zt2a1 : (LEU13) (GLU28) [view usage] : d.264.1.1 |Prim-pol domain |Prim-pol domain |PriA-like |DNA primase small subunit PriA |Sulfolobus solfataricus [TaxId: 2287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, e.5, e.3, c.1, b.82, c.67, b.19, b.81, c.94, a.104, c.2, d.58, i.1, c.108, c.82, b.47, d.117, c.66, c.93, d.165,
i.6, c.23, f.4, c.37, c.36, c.47, d.185, c.55, d.171, d.151, b.60, b.121, c.87, f.26, e.17, c.13, b.1, d.126, b.45, a.123,
d.20, d.110, b.42, a.25, d.38, c.51, b.84, d.106, d.79, d.118, d.41, b.34, d.5, a.39, c.3, b.41, d.15, d.93, c.46, d.113,
d.26, a.42, e.52, d.94, d.224, d.112, b.33, d.264, d.265, d.9, f.7, b.12, a.7, d.18, c.150, b.8, b.103, c.20, d.309, b.48,
d.99