Tableau information
Concept source: d3cv8a_ amino acid (a.a.) range (GLU314)(ASP374)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: EH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU314) (ASN320) E1
(ASN320) (ASP374) H2
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -62.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2rfgb_ : (PRO128) (VAL139) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Hahella chejuensis [TaxId: 158327]
d4iv5d1 : (HIS129) (GLY157) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d2a5kb_ : (LYS5) (MET17) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d1vpmc_ : (ILE2) (ARG11) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Acyl-CoA hydrolase BH0798 |Bacillus halodurans [TaxId: 86665]
d3pj6a_ : (ALA82) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d2yvwa_ : (PHE89) (MET99) [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d4f0fa_ : (HIS1186) (ALA1205) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d3tv5c1 : (TYR1655) (ASP1670) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3l0gb2 : (GLY159) (SER169) [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d1ixia_ : (ASP292) (ILE312) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Escherichia coli [TaxId: 562]
d1dysa_ : (PRO287) (ASN341) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6b [TaxId: 34413]
d1yqwr_ : (THR11) (ILE24) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d2f5va2 : (ILE356) (MET380) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Pyranose 2-oxidase |White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
d1ep1a_ : (ILE216) (LYS226) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d1zowa2 : (ILE176) (HIS189) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
d3uwya_ : (PRO125) (GLY139) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Staphylococcus aureus [TaxId: 282458]
d1vbka1 : (PRO285) (GLY306) [view usage] : c.26.2.6 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ThiI-like |Hypothetical protein PH1313, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d4bn4a_ : (VAL140) (GLY153) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j6wb_ : (GLY150) (SER160) [view usage] : d.185.1.2 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |Autoinducer-2 production protein LuxS |Autoinducer-2 production protein LuxS |Haemophilus influenzae [TaxId: 727]
d3unbg_ : (PHE226) (ALA242) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Mouse (Mus musculus) [TaxId: 10090]
d4lacb_ : (ILE149) (GLY170) [view usage] : a.268.1.1 |PTPA-like |PTPA-like |PTPA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bmub_ : (ARG2) (VAL13) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |automated matches |Pyrococcus furiosus [TaxId: 2261]
d2ijd12 : (HIS519) (GLY534) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d2f6ca2 : (ILE356) (MET380) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Pyranose 2-oxidase |White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
d2im5a2 : (TYR364) (GLY390) [view usage] : c.1.17.2 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |Monomeric nicotinate phosphoribosyltransferase C-terminal domain |Nicotinate phosphoribosyltransferase, C-terminal domain |Porphyromonas gingivalis [TaxId: 837]
d1kkqa_ : (ASN336) (LEU347) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Peroxisome proliferator activated receptor alpha, PPAR-alpha |Human (Homo sapiens) [TaxId: 9606]
d4awua_ : (ASP276) (GLU290) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Shewanella oneidensis [TaxId: 211586]
d4jhia_ : (ASP125) (ASN155) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
d1rmfh2 : (SER126) (SER140) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1epab_ : (LEU145) (SER164) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Retinoic acid-binding protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3co2c_ : (SER318) (SER334) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Mesorhizobium loti [TaxId: 381]
d1uxea_ : (LYS242) (ASN268) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus 37 [TaxId: 52275]
d1ns4a_ : (ASP208) (GLN221) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
d3sg1a_ : (ILE82) (MET92) [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3unbd_ : (PHE218) (ILE233) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1e32a3 : (LYS112) (GLU124) [view usage] : d.31.1.1 |Cdc48 domain 2-like |Cdc48 domain 2-like |Cdc48 domain 2-like |Membrane fusion atpase p97 domain 2, P97-Nc |Mouse (Mus musculus) [TaxId: 10090]
d2j4jf_ : (MET1) (GLU14) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d2doua_ : (GLY322) (GLY336) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1qbmh2 : (THR121) (SER138) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1v96b_ : (ASN68) (LYS89) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PH0500 |Pyrococcus horikoshii [TaxId: 53953]
d1lpab2 : (LYS197) (PRO208) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2dsoe_ : (LEU8) (SER19) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d1quka_ : (ASP292) (ILE312) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Escherichia coli [TaxId: 562]
d1r5ia2 : (ALA52) (ASN78) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Human (Homo sapiens), HLA-DR2 [TaxId: 9606]
d1fuia2 : (ILE295) (TYR309) [view usage] : c.85.1.1 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |L-fucose isomerase, N-terminal and second domains |L-fucose isomerase, N-terminal and second domains |Escherichia coli [TaxId: 562]
d1dmza_ : (VAL715) (LEU730) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Phosphotyrosine binding domain of Rad53 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3cpjg1 : (PRO288) (CYS301) [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4m1va_ : (ALA338) (LEU355) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Unidentified prokaryotic [TaxId: 2725]
d3bpfb_ : (GLN1) (TYR11) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |Falcipain 2 |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1v5pa_ : (VAL63) (SER72) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Tapp2 |Mouse (Mus musculus) [TaxId: 10090]
d3ojca1 : (ILE40) (GLY56) [view usage] : c.78.2.0 |ATC-like |Aspartate/glutamate racemase |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d1ixha_ : (ASP292) (ILE312) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Escherichia coli [TaxId: 562]
d1woka2 : (LEU877) (GLY892) [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3f9fa_ : (LYS5) (MET17) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d1a8ha2 : (ASP90) (GLY115) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Methionyl-tRNA synthetase (MetRS) |Thermus thermophilus [TaxId: 274]
d1ny5a2 : (VAL302) (LYS314) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Transcriptional activator sigm54 (NtrC1), C-terminal domain |Aquifex aeolicus [TaxId: 63363]
d1clqa1 : (ASN158) (LYS169) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d2eeaa_ : (GLY22) (TYR33) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d3a04a_ : (THR146) (VAL169) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]
d4njta_ : (THR82) (LEU93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus 1 [TaxId: 11676]
d3l0ga2 : (GLY159) (SER169) [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d4il2b2 : (GLU190) (PHE202) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |D-mannonate dehydratase |Escherichia coli [TaxId: 199310]
d3ff6a1 : (THR1894) (ILE1925) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ximc_ : (ASP9) (TRP20) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Actinoplanes missouriensis [TaxId: 1866]
d2ceya_ : (GLY264) (SER278) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sialic acid-binding protein SiaP |Haemophilus influenzae [TaxId: 727]
d4kaxb_ : (SER378) (ILE395) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ec2d_ : (SER113) (GLN128) [view usage] : d.58.57.1 |Ferredoxin-like |Transposase IS200-like |Transposase IS200-like |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d2dsoc_ : (LEU8) (SER19) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d3cgta2 : (ALA620) (GLN631) [view usage] : b.3.1.1 |Prealbumin-like |Starch-binding domain-like |Starch-binding domain |Cyclodextrin glycosyltransferase, C-terminal domain |Bacillus circulans, different strains [TaxId: 1397]
d2ctba_ : (TYR248) (GLY262) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Cow (Bos taurus) [TaxId: 9913]
d1ee6a_ : (GLN22) (GLY32) [view usage] : b.80.1.1 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate lyase-like |Pectate lyase |Bacillus sp., strain ksmp15 [TaxId: 1409]
d3zfeb_ : (ASP51) (ARG62) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1zi7b_ : (LYS363) (ASN392) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1noya_ : (SER155) (LYS166) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage T4 [TaxId: 10665]
d3aw1a_ : (LYS5) (MET17) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d2ve4a_ : (ASN139) (PHE159) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d1goja_ : (ILE8) (GLY25) [view usage] : c.37.1.9 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Motor proteins |Kinesin |Fungus (Neurospora crassa) [TaxId: 5141]
d1x3la_ : (ASN259) (GLY283) [view usage] : c.118.1.0 |GckA/TtuD-like |GckA/TtuD-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1g93a_ : (TRP88) (VAL97) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
d1zhwa_ : (LYS363) (ASN392) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1x7na_ : (ALA20) (GLU31) [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Pyrococcus furiosus [TaxId: 2261]
d1d6ub4 : (HIS6) (GLY18) [view usage] : d.82.1.1 |N domain of copper amine oxidase-like |Copper amine oxidase, domain N |Copper amine oxidase, domain N |Copper amine oxidase, domain N |Escherichia coli [TaxId: 562]
d3gp5a_ : (TYR2) (ASN18) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d2rera1 : (ARG76) (ALA89) [view usage] : d.129.3.6 |TBP-like |Bet v1-like |oligoketide cyclase/dehydrase-like |Multifunctional enzyme TcmN, cyclase/aromatase domain |Streptomyces glaucescens [TaxId: 1907]
d1bx2a2 : (ALA52) (ASN78) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Human (Homo sapiens), HLA-DR2 [TaxId: 9606]
d4drxb2 : (LYS372) (LYS402) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d1ha0a2 : (ALA334) (GLY349) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d1cf5a_ : (LYS236) (GLU248) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Beta-momorcharin |Bitter gourd (Momordica charantia) [TaxId: 3673]
d2erfa_ : (SER11) (GLY20) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Thrombospondin 1 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2ixea_ : (ARG639) (LEU650) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3oudb_ : (ASN83) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d4dika2 : (GLU293) (SER308) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d3unba_ : (GLY216) (LEU229) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2m5wa_ : (ASN38) (PHE48) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d5sici_ : (ALA30) (GLY57) [view usage] : d.84.1.1 |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Subtilisin inhibitor |Streptomyces lividans [TaxId: 1916]
d1z3ka_ : (VAL59) (HIS76) [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nt4a_ : (GLY375) (LYS391) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Glucose-1-phosphatase |Escherichia coli [TaxId: 562]
d1n57a_ : (ASN129) (LEU140) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d4m9pa2 : (LYS578) (GLY588) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mlbb2 : (SER123) (SER137) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d3rpha_ : (VAL3) (THR14) [view usage] : c.72.1.4 |Ribokinase-like |Ribokinase-like |YjeF C-terminal domain-like |automated matches |Bacillus subtilis [TaxId: 1423]
d2xlca_ : (TYR295) (HIS315) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |automated matches |Bacillus pumilus [TaxId: 1408]
d2dg1a_ : (LEU8) (SER19) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d1ayea1 : (TYR248) (GLY262) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Human (Homo sapiens) [TaxId: 9606]
d1qula_ : (ASP292) (ILE312) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Escherichia coli [TaxId: 562]
d2ec2a_ : (SER113) (ALA130) [view usage] : d.58.57.1 |Ferredoxin-like |Transposase IS200-like |Transposase IS200-like |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d1vmea1 : (GLU293) (SER308) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |ROO-like flavoprotein TM0755, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d3k8xc1 : (TYR1655) (ASP1670) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4o0ta_ : (SER419) (ARG438) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bmpa_ : (HIS41) (TRP55) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |Bone morphogenetic protein-7 (BMP-7) |Human (Homo sapiens) [TaxId: 9606]
d1ukvg1 : (PRO288) (CYS301) [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |Guanine nucleotide dissociation inhibitor, GDI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3ur8a_ : (VAL154) (PRO169) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d1quia_ : (ASP292) (ILE312) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Escherichia coli [TaxId: 562]
d4luka_ : (ALA20) (GLU31) [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |automated matches |Pyrococcus furiosus [TaxId: 186497]
d2x1la1 : (ASP90) (GLY115) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d2xlce_ : (TYR295) (LEU318) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |automated matches |Bacillus pumilus [TaxId: 1408]
d2eida3 : (ASP524) (ASN535) [view usage] : b.69.1.1 |7-bladed beta-propeller |Galactose oxidase, central domain |Galactose oxidase, central domain |automated matches |Fusarium graminearum (Gibberella zeae) [TaxId: 5518]
d2dqnb2 : (PRO277) (THR291) [view usage] : d.128.1.5 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |GatB/GatE catalytic domain-like |Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d1izya_ : (ASN129) (LEU140) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d1a40a_ : (ASP292) (ILE312) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Escherichia coli [TaxId: 562]
d1cgta2 : (ALA620) (GLN631) [view usage] : b.3.1.1 |Prealbumin-like |Starch-binding domain-like |Starch-binding domain |Cyclodextrin glycosyltransferase, C-terminal domain |Bacillus circulans, different strains [TaxId: 1397]
d3thua2 : (THR178) (ILE190) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Sphingomonas sp. [TaxId: 314266]
d2cexd_ : (GLY264) (SER278) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sialic acid-binding protein SiaP |Haemophilus influenzae [TaxId: 727]
d3ea8a_ : (LYS5) (MET17) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d3b0hb1 : (GLY94) (TYR103) [view usage] : d.58.36.0 |Ferredoxin-like |Nitrite/Sulfite reductase N-terminal domain-like |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d4hv4a3 : (PHE328) (GLY341) [view usage] : c.59.1.0 |MurD-like peptide ligases, peptide-binding domain |MurD-like peptide ligases, peptide-binding domain |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d2k11a_ : (LYS1) (GLN11) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Human (Homo sapiens), des1-7 [TaxId: 9606]
d3atwa_ : (LYS5) (MET17) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d1hsja1 : (ASN419) (SER430) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Staphylococcal accessory regulator A homolog, SarR |Staphylococcus aureus [TaxId: 1280]
d2vhga1 : (VAL116) (GLN131) [view usage] : d.58.57.1 |Ferredoxin-like |Transposase IS200-like |Transposase IS200-like |ISHP608 transposase |Helicobacter pylori [TaxId: 210]
d1ug6a_ : (ALA351) (GLY376) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Thermus thermophilus [TaxId: 274]
d1k6ka_ : (ASP77) (SER97) [view usage] : a.174.1.1 |Double Clp-N motif |Double Clp-N motif |Double Clp-N motif |N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone |Escherichia coli [TaxId: 562]
d1woya2 : (ASP90) (GLY115) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Thermus thermophilus [TaxId: 274]
d1t1ha_ : (GLY300) (ASN318) [view usage] : g.44.1.2 |RING/U-box |RING/U-box |U-box |E3 ubiquitin ligase PUB14 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2vxla_ : (TRP88) (VAL97) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Cow (Bos taurus) [TaxId: 9913]
d2gskb_ : (LEU156) (ARG171) [view usage] : d.212.1.2 |TolA/TonB C-terminal domain |TolA/TonB C-terminal domain |TonB |TonB |Escherichia coli [TaxId: 562]
d2wq8a2 : (ASP524) (ASP535) [view usage] : b.69.1.1 |7-bladed beta-propeller |Galactose oxidase, central domain |Galactose oxidase, central domain |automated matches |Fusarium graminearum (Gibberella zeae) [TaxId: 5518]
d1x82a_ : (ALA20) (GLU31) [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Pyrococcus furiosus [TaxId: 2261]
d1grwc_ : (LYS102) (GLY111) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2i1la2 : (ARG68) (ILE77) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |FMN adenylyltransferase domain of bifunctional FAD synthetase |Thermotoga maritima [TaxId: 2336]
d3r5xd1 : (MSE118) (GLY130) [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d4ihka_ : (PRO1101) (GLY1122) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2f7fa1 : (ASP311) (ALA322) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
d1h1lb_ : (ALA65) (PHE80) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Klebsiella pneumoniae [TaxId: 573]
d2dg1c_ : (LEU8) (SER19) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d1dm9b_ : (LEU84) (PRO110) [view usage] : d.66.1.3 |Alpha-L RNA-binding motif |Alpha-L RNA-binding motif |Heat shock protein 15 kD |Heat shock protein 15 kD |Escherichia coli [TaxId: 562]
d2lc5a_ : (GLY65) (GLY80) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Entamoeba histolytica [TaxId: 294381]
d2bmua_ : (ARG2) (VAL13) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |automated matches |Pyrococcus furiosus [TaxId: 2261]
d2cjsa1 : (PHE118) (ALA150) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Unc-13 homolog A |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1tzla2 : (ILE356) (MSE380) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Pyranose 2-oxidase |White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
d2p0aa2 : (GLU365) (GLN395) [view usage] : d.142.1.3 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Synapsin C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vs6k1 : (THR97) (ALA119) [view usage] : b.39.1.1 |Ribosomal protein L14 |Ribosomal protein L14 |Ribosomal protein L14 |Ribosomal protein L14 |Escherichia coli [TaxId: 562]
d4kqwa1 : (THR13) (LEU28) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Slackia exigua [TaxId: 649764]
d1hn9a2 : (SER176) (LEU188) [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Ketoacyl-ACP synthase III (FabH) |Escherichia coli [TaxId: 562]
d4pt4a_ : (VAL76) (GLY91) [view usage] : a.55.1.0 |IHF-like DNA-binding proteins |IHF-like DNA-binding proteins |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1j6wa_ : (GLY150) (SER160) [view usage] : d.185.1.2 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |Autoinducer-2 production protein LuxS |Autoinducer-2 production protein LuxS |Haemophilus influenzae [TaxId: 727]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.80, e.8, c.1, b.82, c.67, c.69, c.94, a.104, d.68, c.2, c.6, d.58, b.69, c.68, b.29, c.26, b.30, b.47, c.56,
c.92, c.14, d.165, b.50, e.18, d.129, c.72, c.23, d.144, c.37, d.185, c.55, d.166, c.95, d.153, b.60, b.121, d.3, c.60, c.31,
c.85, c.62, b.1, a.123, c.78, c.73, d.38, d.19, b.21, b.55, d.79, c.120, c.59, d.142, b.26, a.4, d.5, a.39, c.3, h.3,
d.128, b.7, b.3, d.16, a.55, d.93, d.82, g.17, d.338, a.174, g.44, a.268, d.31, c.118, d.66, d.84, d.212, b.39