Tableau information
Concept source: d1kz9c_ amino acid (a.a.) range (ASP79)(GLY114)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: EH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP79) (LYS89) E1
(MET93) (GLY114) H2
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -173.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ctka1 : (THR3) (LEU25) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Bouganin |Bougainvillea (Bougainvillea spectabilis) [TaxId: 146096]
d3pc6a_ : (GLN580) (LEU596) [view usage] : c.15.1.1 |BRCT domain |BRCT domain |DNA-repair protein XRCC1 |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1h6ha_ : (ALA91) (LEU119) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |p40phox NADPH oxidase |Human (Homo sapiens) [TaxId: 9606]
d1y5ea1 : (ASP74) (LEU98) [view usage] : c.57.1.1 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MogA-like |MoaB |Bacillus cereus [TaxId: 1396]
d1n2ta_ : (ILE368) (ALA389) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystine C-S lyase C-des |Synechocystis sp. [TaxId: 1143]
d3ti2a_ : (GLY161) (ALA184) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio cholerae [TaxId: 243277]
d1p4rb1 : (GLN5) (GLY28) [view usage] : c.24.1.3 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Inosicase |IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC |Human (Homo sapiens) [TaxId: 9606]
d4gwoa_ : (HIS267) (ALA292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Salmonella enterica [TaxId: 99287]
d1o3ya_ : (ASN152) (LEU177) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF1 [TaxId: 9606]
d1je3a_ : (ASP27) (LEU51) [view usage] : d.68.3.3 |IF3-like |SirA-like |SirA-like |hypothetical protein YedF (EC005) |Escherichia coli [TaxId: 562]
d1amaa_ : (GLY385) (THR409) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Chicken (Gallus gallus), mitochondria [TaxId: 9031]
d1t35e_ : (LYS2) (GLY33) [view usage] : c.129.1.1 |MCP/YpsA-like |MCP/YpsA-like |MoCo carrier protein-like |Hypothetical protein YvdD |Bacillus subtilis [TaxId: 1423]
d4jz6a_ : (ARG222) (LEU244) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1mkza_ : (GLU7) (GLY41) [view usage] : c.57.1.1 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MogA-like |MoaB |Escherichia coli [TaxId: 562]
d3rzva_ : (TRP333) (THR351) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |Catalytic domain of AMSH |Human (Homo sapiens) [TaxId: 9606]
d2wc1a_ : (ILE92) (PHE107) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d2a8cd_ : (GLY192) (SER213) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |automated matches |Haemophilus influenzae [TaxId: 727]
d4jyba_ : (THR232) (GLY266) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Metallochaperone MeaB |Methylobacterium extorquens [TaxId: 408]
d3cjqb2 : (VAL5) (GLY31) [view usage] : d.47.1.1 |Ribosomal L11/L12e N-terminal domain |Ribosomal L11/L12e N-terminal domain |Ribosomal L11/L12e N-terminal domain |Ribosomal protein L11, N-terminal domain |Thermus thermophilus [TaxId: 274]
d1p88a_ : (GLY160) (THR179) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Escherichia coli [TaxId: 562]
d3pd6a_ : (GLY406) (THR429) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2yivx_ : (THR362) (ILE378) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d1orta1 : (LYS46) (PHE63) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Pseudomonas aeruginosa [TaxId: 287]
d1r2ka_ : (GLU6) (GLY40) [view usage] : c.57.1.1 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |MogA-like |MoaB |Escherichia coli [TaxId: 562]
d3phbe_ : (GLN82) (THR97) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3h5ka_ : (ILE1) (ALA27) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Phytolacca dioica [TaxId: 29725]
d3hqda_ : (ARG329) (ILE359) [view usage] : c.37.1.9 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Motor proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1owla2 : (ILE5) (SER28) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
d3bkuc_ : (GLY52) (HIS77) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Escherichia coli [TaxId: 562]
d1ml4a1 : (GLY44) (GLY70) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Pyrococcus abyssi [TaxId: 29292]
d1es9a_ : (GLY137) (LEU163) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d2f51a_ : (LEU93) (LYS112) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Trichomonas vaginalis [TaxId: 5722]
d3fcca_ : (GLN186) (ILE203) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
d2feoa_ : (LEU200) (ALA220) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Escherichia coli [TaxId: 562]
d2y7pa_ : (ASN274) (LEU297) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
d1zx1b_ : (GLN187) (THR213) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
d1yvpa2 : (GLY515) (ASP536) [view usage] : c.62.1.5 |vWA-like |vWA-like |RoRNP C-terminal domain-like |60-kda SS-A/Ro ribonucleoprotein, RoRNP |African clawed frog (Xenopus laevis) [TaxId: 8355]
d2itha_ : (GLU2) (ARG36) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Haloferax volcanii [TaxId: 2246]
d2gkpa1 : (ASP139) (CYS163) [view usage] : d.351.1.1 |NMB0488-like |NMB0488-like |NMB0488-like |Hypothetical protein NMB0488 |Neisseria meningitidis [TaxId: 487]
d1nyca_ : (GLN3) (LEU26) [view usage] : b.61.2.2 |Streptavidin-like |beta-Barrel protease inhibitors |Staphostatin |Staphostatin B (SspC) |Staphylococcus aureus [TaxId: 1280]
d1m34e_ : (PHE121) (ALA136) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1d8va_ : (ASP1) (THR24) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Beta-momorcharin |Bitter gourd (Momordica charantia) [TaxId: 3673]
d3d7wa_ : (GLU2) (SER29) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d2a8ca_ : (GLY192) (SER213) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |automated matches |Haemophilus influenzae [TaxId: 727]
d3fw1a_ : (GLN187) (GLN212) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
d1mkpa_ : (LYS254) (ASN286) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Mapk phosphatase |Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]
d2pi7b_ : (LYS964) (LYS997) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1dyra_ : (SER6) (SER41) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Fungus (Pneumocystis carinii) [TaxId: 4754]
d1moma_ : (ASP1) (ASN23) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Momorcharin (momordin) |Bitter gourd (Momordica charantia) [TaxId: 3673]
d4epka_ : (ARG264) (VAL283) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d4ifra_ : (ARG264) (GLY285) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d2a8ce_ : (GLY192) (SER213) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |automated matches |Haemophilus influenzae [TaxId: 727]
d3p7xa_ : (LEU48) (ASP70) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d3skpa_ : (GLY403) (ASP420) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1puma_ : (GLU2) (SER29) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d3p71t_ : (LEU317) (ILE332) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ifea_ : (VAL90) (GLU120) [view usage] : d.68.1.1 |IF3-like |Translation initiation factor IF3, C-terminal domain |Translation initiation factor IF3, C-terminal domain |Translation initiation factor IF3, C-terminal domain |Escherichia coli [TaxId: 562]
d1y4hc_ : (GLN3) (LEU26) [view usage] : b.61.2.2 |Streptavidin-like |beta-Barrel protease inhibitors |Staphostatin |Staphostatin B (SspC) |Staphylococcus aureus [TaxId: 1280]
d3a2ba_ : (ILE366) (ALA393) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Sphingobacterium multivorum [TaxId: 28454]
d3e24b_ : (GLY192) (SER213) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |automated matches |Haemophilus influenzae [TaxId: 727]
d2yy5b_ : (LYS3) (VAL23) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Mycoplasma pneumoniae [TaxId: 272634]
d2hcma_ : (GLY54) (GLY88) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4j2ha_ : (ARG11) (GLY34) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3mf3d_ : (GLY192) (ILE214) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |automated matches |Haemophilus influenzae [TaxId: 727]
d1qzfa1 : (ASN5) (ASN42) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain |Cryptosporidium hominis [TaxId: 237895]
d1owma2 : (PRO4) (SER28) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
d1al3a_ : (HIS267) (ALA292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Cofactor-binding fragment of LysR-type protein CysB |Klebsiella aerogenes [TaxId: 28451]
d4fgld_ : (GLN187) (THR213) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
d1mrga_ : (ASP1) (ALA24) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Momorcharin (momordin) |Bitter gourd (Momordica charantia) [TaxId: 3673]
d1b5ta_ : (ASN24) (LYS52) [view usage] : c.1.23.1 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Methylenetetrahydrofolate reductase |Methylenetetrahydrofolate reductase |Escherichia coli [TaxId: 562]
d9rubb1 : (SER318) (THR344) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Rhodospirillum rubrum [TaxId: 1085]
d2a8cc_ : (GLY192) (SER213) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |automated matches |Haemophilus influenzae [TaxId: 727]
d2znva_ : (TRP345) (THR363) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vxra1 : (ASP931) (GLN954) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d3mf3e_ : (GLY192) (SER213) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |automated matches |Haemophilus influenzae [TaxId: 727]
d1zpwx1 : (LEU5) (GLY29) [view usage] : d.58.58.1 |Ferredoxin-like |TTP0101/SSO1404-like |TTP0101/SSO1404-like |Hypothetical protein TTP0101 (TT1823) |Thermus thermophilus [TaxId: 274]
d1aa6a2 : (ALA102) (GLY129) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase H |Escherichia coli [TaxId: 562]
d3i9v33 : (GLU340) (LYS365) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2o3ga1 : (LEU182) (ASN198) [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Putative protein NMB1485 |Neisseria meningitidis [TaxId: 487]
d2zvia2 : (ASP298) (VAL324) [view usage] : c.1.14.0 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3s3ea_ : (ALA22) (GLU52) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1giua_ : (ASP1) (ALA24) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Trichosanthin |Mongolian snake gourd (Trichosanthes kirilowii Maxim.) [TaxId: 3677]
d1qnfa2 : (ILE5) (SER28) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
d1m2ta_ : (GLU2) (VAL28) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d3hiqb_ : (ILE2) (ILE27) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Common soapwort (Saponaria officinalis) [TaxId: 3572]
d3qgva1 : (GLN309) (GLU334) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Pyrococcus woesei [TaxId: 2262]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.81, c.94, d.68, c.2, d.58, b.29, c.82, c.26, c.56, c.66, c.45, d.165, c.23, c.37, c.47, c.62, c.57, c.71,
e.23, c.78, c.97, c.53, c.28, c.24, c.16, d.145, e.26, b.61, c.129, c.15, d.47, d.189, d.351