Tableau information
Concept source: d1clka_ amino acid (a.a.) range (GLY188)(LEU205)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: EH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY188) (LEU192) E1
(THR194) (LEU205) H2
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -49.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3kk1a1 : (GLY213) (GLU224) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1kz7b_ : (GLU49) (TYR64) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
d3u5ex_ : (ASP129) (ILE139) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d1edba_ : (ASN3) (LEU15) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d2jalb_ : (GLY364) (GLY389) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermotoga maritima [TaxId: 2336]
d4mgga2 : (GLY351) (GLY360) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Labrenzia aggregata [TaxId: 384765]
d2a8ka1 : (GLY42) (TYR57) [view usage] : d.243.1.2 |Colicin D/E5 nuclease domain |Colicin D/E5 nuclease domain |Colicin E5 nuclease domain |Colicin E5 |Escherichia coli [TaxId: 562]
d4gdka_ : (LYS53) (LYS93) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ja8b_ : (PRO167) (ALA181) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pnza1 : (ILE74) (GLU87) [view usage] : d.14.1.0 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |automated matches |automated matches |Pyrococcus abyssi [TaxId: 29292]
d2ynaa_ : (LYS5) (ILE17) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Tylonycteris bat coronavirus hku4 [TaxId: 694007]
d3mwma_ : (ASN119) (ALA136) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d1qynd_ : (ALA129) (GLN144) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Escherichia coli [TaxId: 562]
d1clib1 : (GLU1057) (LYS1078) [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain |Escherichia coli [TaxId: 562]
d2vsuc_ : (GLU136) (GLY147) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d2p65a_ : (TYR8) (GLY19) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1daxa_ : (ALA1) (ILE12) [view usage] : d.58.1.4 |Ferredoxin-like |4Fe-4S ferredoxins |Single 4Fe-4S cluster ferredoxin |Ferredoxin I |Desulfovibrio africanus [TaxId: 873]
d1s7aa_ : (GLY45) (PHE55) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |Lupus La autoantigen N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3huta_ : (TRP151) (GLY174) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodospirillum rubrum [TaxId: 269796]
d2w27a2 : (GLU332) (LYS342) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |Hypothetical protein YkuI, C-terminal domain |Bacillus subtilis [TaxId: 1423]
d1i19a2 : (GLY210) (VAL226) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Cholesterol oxidase |Brevibacterium sterolicum [TaxId: 1702]
d1v6ya_ : (GLY290) (GLY315) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Streptomyces olivaceoviridis [TaxId: 1921]
d3u7ba_ : (GLY300) (ARG326) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fungus (Fusarium oxysporum) [TaxId: 5507]
d3toxa_ : (GLY181) (LEU201) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1qync_ : (ALA129) (TYR140) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Escherichia coli [TaxId: 562]
d3wsea_ : (ILE98) (ILE108) [view usage] : c.135.1.0 |NIF3 (NGG1p interacting factor 3)-like |NIF3 (NGG1p interacting factor 3)-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d3bema_ : (VAL77) (GLN89) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2cqka1 : (GLN80) (MET90) [view usage] : a.4.5.46 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |La domain |La-related protein 4 LARP4 |Human (Homo sapiens) [TaxId: 9606]
d1mgva_ : (ALA206) (MET220) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA |Escherichia coli [TaxId: 562]
d1owla2 : (ILE32) (SER44) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
d3bwia_ : (LYS212) (GLY234) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
d4l04a_ : (LYS126) (ALA141) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ml4a1 : (ASN133) (GLY151) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Pyrococcus abyssi [TaxId: 29292]
d3gagb_ : (VAL78) (ASP89) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d4khna2 : (ARG576) (ALA593) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d1cera2 : (ASN202) (THR214) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Thermus aquaticus [TaxId: 271]
d1c50a_ : (ALA673) (LEU683) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3ao9a_ : (THR51) (TYR65) [view usage] : d.243.1.2 |Colicin D/E5 nuclease domain |Colicin D/E5 nuclease domain |Colicin E5 nuclease domain |Colicin E5 |Escherichia coli [TaxId: 562]
d3bemb_ : (VAL77) (GLN89) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4ffva1 : (VAL191) (GLU204) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1gd1o2 : (SER202) (VAL214) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
d4qp0a_ : (ILE101) (GLY125) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d3u7bb_ : (GLY300) (ARG326) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fungus (Fusarium oxysporum) [TaxId: 5507]
d2j5ik_ : (GLU136) (GLY147) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d1goka_ : (GLY41) (LYS50) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d3c0ya1 : (THR520) (GLN532) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |Histone deacetylase 7, HDAC7 |Human (Homo sapiens) [TaxId: 9606]
d3ik1a_ : (LYS50) (GLY67) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
d1qzfa2 : (LYS284) (GLY301) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain |Cryptosporidium hominis [TaxId: 237895]
d4l04c_ : (LYS126) (ALA141) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ra2b_ : (LYS49) (HIS59) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |Uncharacterized protein YgdI |Salmonella typhimurium [TaxId: 90371]
d1hxmb2 : (LYS133) (LEU146) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), delta-chain [TaxId: 9606]
d1xyza_ : (GLY810) (MET835) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase |Clostridium thermocellum, XynZ [TaxId: 1515]
d4cbya_ : (THR654) (GLN666) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2a7kh_ : (THR124) (GLY135) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Carbapenem biosynthes protein CarB |Pectobacterium carotovorum [TaxId: 554]
d2m2da_ : (LEU79) (ARG96) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Programmed cell death protein 1, PD1, extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d1m0va_ : (GLU36) (ALA64) [view usage] : d.195.1.1 |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |Yersinia pseudotuberculosis [TaxId: 633]
d2vupa_ : (ALA98) (LYS118) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d4coga_ : (ALA51) (ALA61) [view usage] : c.8.8.0 |The "swivelling" beta/beta/alpha domain |Putative cyclase |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1k6aa_ : (GLY41) (LYS50) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d4e5yd_ : (GLY6) (GLY17) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3os4a2 : (LEU335) (ASP346) [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d1usvf_ : (VAL12) (LYS27) [view usage] : d.83.2.1 |Aha1/BPI domain-like |Activator of Hsp90 ATPase, Aha1 |Activator of Hsp90 ATPase, Aha1 |Activator of Hsp90 ATPase, Aha1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1usvh_ : (TRP11) (LYS27) [view usage] : d.83.2.1 |Aha1/BPI domain-like |Activator of Hsp90 ATPase, Aha1 |Activator of Hsp90 ATPase, Aha1 |Activator of Hsp90 ATPase, Aha1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1lwda_ : (LYS127) (ALA142) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |NADP-dependent isocitrate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
d2deba1 : (GLY630) (GLY653) [view usage] : c.43.1.0 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1tsva_ : (LYS50) (GLY67) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
d1b73a2 : (ALA195) (SER207) [view usage] : c.78.2.1 |ATC-like |Aspartate/glutamate racemase |Aspartate/glutamate racemase |Glutamate racemase |Aquifex pyrophilus [TaxId: 2714]
d4l4oa_ : (ASN45) (LYS54) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Caldicellulosiruptor bescii [TaxId: 521460]
d2r84a1 : (LYS53) (ASN63) [view usage] : c.30.1.8 |PreATP-grasp domain |PreATP-grasp domain |PurP N-terminal domain-like |5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP |Pyrococcus furiosus [TaxId: 2261]
d2hisa_ : (GLY288) (PHE312) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Cellulomonas fimi [TaxId: 1708]
d3q94a_ : (PRO2) (GLY16) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1ozna_ : (ALA94) (LEU104) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |Reticulon 4 receptor (Nogo-66 receptor, Ngr) |Human (Homo sapiens) [TaxId: 9606]
d1clxa_ : (ASN38) (LYS47) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Pseudomonas fluorescens [TaxId: 294]
d1expa_ : (GLY288) (PHE312) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Cellulomonas fimi [TaxId: 1708]
d2rl3b_ : (SER21) (LYS30) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d3hiqa_ : (LEU39) (PRO49) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Common soapwort (Saponaria officinalis) [TaxId: 3572]
d1yfea_ : (ILE391) (SER405) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1be0a_ : (ASN3) (LEU15) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d4k4sa_ : (HIS336) (GLY351) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human poliovirus 1 [TaxId: 12081]
d4b3ka_ : (GLY382) (GLY407) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d4hnak_ : (LYS10) (ARG25) [view usage] : c.37.1.9 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Motor proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3d23c_ : (LYS196) (ASN215) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus [TaxId: 443239]
d2ba1d1 : (ILE74) (GLU87) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease 1, ECX1 |Archaeoglobus fulgidus [TaxId: 2234]
d2yvta1 : (ILE42) (ARG59) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Uncharacterized protein Aq_1956 |Aquifex aeolicus [TaxId: 63363]
d2vzec_ : (GLY190) (ALA201) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qfyb_ : (ALA310) (GLY324) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1sbpa_ : (LYS279) (GLY288) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sulphate-binding protein |Salmonella typhimurium [TaxId: 90371]
d1ghsa_ : (LEU164) (ASN176) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
d3mwmb_ : (ASN119) (GLY135) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d1cnza_ : (ASN130) (GLY147) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Salmonella typhimurium [TaxId: 90371]
d4as7a_ : (ASN18) (SER36) [view usage] : c.37.1.9 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Motor proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1owma2 : (ILE32) (SER44) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
d1jr2a_ : (VAL35) (PRO53) [view usage] : c.113.1.1 |HemD-like |HemD-like |HemD-like |Uroporphyrinogen III synthase (U3S, HemD) |Human (Homo sapiens) [TaxId: 9606]
d1zsxa_ : (CYS37) (GLY48) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2i0ka2 : (GLY210) (VAL226) [view usage] : d.145.1.0 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |automated matches |automated matches |Brevibacterium sterolicum [TaxId: 1702]
d4nvtb_ : (THR93) (HIS107) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Brucella melitensis [TaxId: 546272]
d4ln8b_ : (ALA5) (GLY20) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus [TaxId: 1332244]
d1xa1b_ : (ASN15) (GLY27) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Regulatory protein BlaR1 |Staphylococcus aureus [TaxId: 1280]
d4hpga_ : (LEU174) (ASN186) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d2axla1 : (SER8) (GLY26) [view usage] : a.4.5.43 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |RecQ helicase DNA-binding domain-like |Werner syndrome ATP-dependent helicase WRN |Human (Homo sapiens) [TaxId: 9606]
d3gzna_ : (LEU397) (GLY410) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d4cbyb_ : (THR654) (GLN666) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b0ha1 : (GLY94) (TYR103) [view usage] : d.58.36.0 |Ferredoxin-like |Nitrite/Sulfite reductase N-terminal domain-like |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1efza_ : (ARG97) (SER110) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d1hnib_ : (LYS104) (VAL118) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d2k2qa_ : (SER30) (GLY42) [view usage] : a.28.1.2 |Acyl carrier protein-like |ACP-like |Peptidyl carrier domain |Peptidyl carrier protein (PCP), thioester domain |Bacillus brevis [TaxId: 1393]
d1e5na_ : (ASN38) (LYS47) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Pseudomonas fluorescens [TaxId: 294]
d3q6fa2 : (SER114) (ALA127) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2l72a_ : (GLY4) (LYS22) [view usage] : d.109.1.0 |Gelsolin-like |Actin depolymerizing proteins |automated matches |automated matches |Toxoplasma gondii [TaxId: 5811]
d1rpia_ : (ALA82) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d1j2ea1 : (ILE193) (GLU205) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2qfwa_ : (LYS127) (ALA142) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1e3ua_ : (ILE22) (LYS30) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d2w27b2 : (GLU332) (LYS342) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |Hypothetical protein YkuI, C-terminal domain |Bacillus subtilis [TaxId: 1423]
d2blma_ : (ALA272) (LYS295) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
d2z36a_ : (ARG143) (GLY165) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Nonomuraea recticatena [TaxId: 46178]
d3j38t_ : (GLY120) (GLY150) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d2dt5a2 : (ALA183) (ASN202) [view usage] : c.2.1.12 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Transcriptional repressor Rex, C-terminal domain |Transcriptional repressor Rex, C-terminal domain |Thermus aquaticus [TaxId: 271]
d4cbyd_ : (THR654) (GLN666) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2basa2 : (GLU332) (LYS342) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |Hypothetical protein YkuI, C-terminal domain |Bacillus subtilis [TaxId: 1423]
d3q7va_ : (ASP16) (GLY27) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Staphylococcus aureus [TaxId: 1280]
d4ja8a_ : (PRO167) (ALA181) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3pn8a_ : (GLY388) (GLY414) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d1qnfa2 : (ILE32) (SER44) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
d2xzm2_ : (VAL110) (GLY126) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1o7fa3 : (ASN424) (ALA444) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Regulatory domain of Epac2, domains 1 and 3 |Mouse (Mus musculus) [TaxId: 10090]
d3us8a_ : (LYS126) (ALA141) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3kj4a_ : (GLN143) (ALA154) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4eknb1 : (ASN129) (GLY147) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d4nvta_ : (THR93) (HIS107) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Brucella melitensis [TaxId: 546272]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, e.8, e.3, c.1, c.10, b.82, c.67, c.69, c.94, a.104, c.2, d.159, d.58, i.1, b.47, d.117, d.92, c.77, c.93, c.14,
c.113, c.135, c.42, d.165, a.127, b.50, c.37, c.47, d.14, c.87, d.81, b.1, e.23, c.78, d.110, c.43, c.8, c.28, c.111, d.79,
a.4, d.90, d.145, h.3, d.109, b.38, c.30, d.15, d.33, a.28, d.83, d.195, d.243