Tableau information
Concept source: d1dxea_ amino acid (a.a.) range (PHE233)(LYS255)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: EH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE233) (GLY237) E1
(SER238) (LYS255) H2
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 33.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3irxa1 : (LYS104) (SER117) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d2d1pe_ : (GLN75) (GLY87) [view usage] : c.114.1.1 |DsrEFH-like |DsrEFH-like |DsrEF-like |tRNA 2-thiouridine synthesizing protein C, TusC |Escherichia coli [TaxId: 562]
d1yq9h1 : (ASN7) (ILE17) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio gigas [TaxId: 879]
d2x24a1 : (ASN279) (VAL293) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1xcba2 : (VAL182) (ASN202) [view usage] : c.2.1.12 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Transcriptional repressor Rex, C-terminal domain |Transcriptional repressor Rex, C-terminal domain |Thermus aquaticus [TaxId: 271]
d1wcqc3 : (PRO49) (GLY63) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
d2pnza2 : (ALA160) (TYR182) [view usage] : d.101.1.0 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |automated matches |automated matches |Pyrococcus abyssi [TaxId: 29292]
d1di0c_ : (ILE86) (GLU106) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
d3p8ta_ : (SER258) (GLY274) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |automated matches |Pyrococcus abyssi [TaxId: 29292]
d2fug13 : (GLN288) (THR309) [view usage] : d.15.13.1 |beta-Grasp (ubiquitin-like) |Nqo1 middle domain-like |Nqo1 middle domain-like |NADH-quinone oxidoreductase chain 1, Nqo1 |Thermus thermophilus [TaxId: 274]
d1kf6a3 : (VAL229) (GLY251) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Fumarate reductase |Escherichia coli [TaxId: 562]
d4mf4e_ : (LEU238) (SER261) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1ylta_ : (ASN271) (ALA287) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
d3bfea_ : (ASP271) (ILE285) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Citrobacter sedlakii [TaxId: 67826]
d2v25a_ : (TYR99) (LYS121) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
d3tqqa2 : (GLN284) (ASN300) [view usage] : b.46.1.0 |FMT C-terminal domain-like |FMT C-terminal domain-like |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d1upbc3 : (VAL484) (GLY503) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d1vf5d1 : (THR55) (HIS73) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |ISP subunit from the cytochrome b6f complex, soluble domain |Mastigocladus laminosus [TaxId: 83541]
d2ahjd_ : (THR158) (GLY170) [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |Iron-containing nitrile hydratase |Rhodococcus erythropolis [TaxId: 1833]
d4skne_ : (TYR116) (MET131) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Human (Homo sapiens) [TaxId: 9606]
d3w32a_ : (GLN791) (GLU804) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |EGF receptor tyrosine kinase, Erbb-1 |Human (Homo sapiens) [TaxId: 9606]
d1noia_ : (ALA673) (GLY685) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1msca_ : (ASN55) (GLY73) [view usage] : d.85.1.1 |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |MS2 virus coat protein |Bacteriophage MS2 [TaxId: 12022]
d4r1ra2 : (ARG511) (GLY528) [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
d4kd5a_ : (LEU121) (THR144) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3h7ma_ : (ILE140) (ARG161) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Geobacter sulfurreducens [TaxId: 35554]
d4hzya_ : (PHE100) (LYS112) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d3n26a_ : (LEU121) (SER140) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Chlamydophila pneumoniae [TaxId: 83558]
d2ooya_ : (ILE497) (GLY510) [view usage] : d.129.6.2 |TBP-like |KA1-like |Ssp2 C-terminal domain-like |Snf1-like protein kinase ssp2 |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1beea_ : (VAL2) (LEU15) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d3t95a_ : (SER124) (GLN146) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Yersinia pestis [TaxId: 214092]
d4le0a_ : (GLY119) (TYR132) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d3ejwa_ : (SER99) (GLU120) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d3r5xd2 : (GLY78) (MSE93) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-Ala-D-Ala ligase, N-domain |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1qy6a_ : (PHE192) (ILE210) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |V8 protease |Staphylococcus aureus [TaxId: 1280]
d1zlqa1 : (ASP70) (ARG95) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d1ncbn_ : (TYR100) (GLU110) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d1wp5a_ : (ILE300) (HIS323) [view usage] : b.68.10.1 |6-bladed beta-propeller |GyrA/ParC C-terminal domain-like |GyrA/ParC C-terminal domain-like |Topoisomerase IV subunit A, ParC, C-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d3da0b2 : (THR152) (HIS168) [view usage] : b.21.1.0 |Virus attachment protein globular domain |Virus attachment protein globular domain |automated matches |automated matches |Lactococcus phage [TaxId: 35345]
d2blna1 : (THR278) (GLY297) [view usage] : b.46.1.1 |FMT C-terminal domain-like |FMT C-terminal domain-like |Post formyltransferase domain |Polymyxin resistance protein ArnA, domain 2 |Escherichia coli [TaxId: 562]
d1a7lb_ : (LYS179) (LYS202) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d3ecfa1 : (ASN30) (VAL59) [view usage] : d.17.4.21 |Cystatin-like |NTF2-like |Ava4193-like |Uncharacterized protein Ava4193 |Anabaena variabilis [TaxId: 1172]
d3vpda1 : (ILE74) (ASP88) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
d4pyna_ : (THR207) (GLY218) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4qiid_ : (ALA179) (GLY189) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1npto2 : (SER202) (LEU218) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
d1sgde_ : (GLY224) (ALA236) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease B |Streptomyces griseus, strain k1 [TaxId: 1911]
d1di0d_ : (ILE86) (GLU106) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
d2pl0a_ : (ASN359) (ILE389) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Lymphocyte kinase (lck) |Human (Homo sapiens) [TaxId: 9606]
d1c3ra_ : (VAL4) (TYR15) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |HDAC homologue |Aquifex aeolicus [TaxId: 63363]
d4kd5b_ : (LEU121) (THR144) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d2d1pb1 : (GLN75) (GLY87) [view usage] : c.114.1.1 |DsrEFH-like |DsrEFH-like |DsrEF-like |tRNA 2-thiouridine synthesizing protein C, TusC |Escherichia coli [TaxId: 562]
d2wapa_ : (THR115) (SER126) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2poza2 : (MSE329) (ASP340) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Mesorhizobium loti [TaxId: 266835]
d4a5ra_ : (ASP271) (ASN291) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]
d3rmtc_ : (HIS230) (MET249) [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d2bisb_ : (THR213) (LEU229) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |automated matches |Pyrococcus abyssi [TaxId: 29292]
d1r8la_ : (LYS26) (GLY40) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Bacillus licheniformis [TaxId: 1402]
d1ymsb_ : (ASN271) (LEU290) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
d4pz0a_ : (SER131) (ILE147) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Bacillus anthracis [TaxId: 198094]
d1braa_ : (ASP223) (ASN245) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ghia_ : (SER271) (PHE290) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d2zq9a_ : (LYS271) (HIS288) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TOHO-1 [TaxId: 562]
d4gv8d_ : (GLY56) (LYS70) [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 12360]
d2xzga1 : (PRO6) (GLY19) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4hzza_ : (PHE100) (LYS112) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d1xv2c_ : (ASN3) (ALA16) [view usage] : d.290.1.1 |AF0104/ALDC/Ptd012-like |AF0104/ALDC/Ptd012-like |Alpha-acetolactate decarboxylase-like |Hypothetical protein SA2394 |Staphylococcus aureus [TaxId: 1280]
d2sspe_ : (TYR116) (MET131) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Human (Homo sapiens) [TaxId: 9606]
d1euta3 : (PRO49) (GLY63) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Micromonospora sialidase, N-terminal domain |Micromonospora viridifaciens [TaxId: 1881]
d3u81a_ : (THR164) (GLY175) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1k8ha_ : (LYS5) (LYS18) [view usage] : b.111.1.1 |Small protein B (SmpB) |Small protein B (SmpB) |Small protein B (SmpB) |Small protein B (SmpB) |Aquifex aeolicus [TaxId: 63363]
d3r5gb_ : (THR229) (GLU244) [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1wvja_ : (PHE106) (GLN130) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d1a9ua_ : (ARG49) (SER61) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase p38 |Human (Homo sapiens) [TaxId: 9606]
d1v4vb_ : (ILE171) (LEU188) [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |UDP-N-acetylglucosamine 2-epimerase |Thermus thermophilus [TaxId: 274]
d2y43b_ : (ASP71) (GLN94) [view usage] : g.44.1.0 |RING/U-box |RING/U-box |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4dika2 : (ASN380) (GLU398) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d3oj2c1 : (THR188) (ILE204) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qima_ : (ASP70) (ARG95) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d1xwdc1 : (GLU84) (PRO95) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |Follicle-stimulating hormone receptor |Human (Homo sapiens) [TaxId: 9606]
d1c8fa_ : (ARG81) (VAL92) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |Parvovirus (panleukopenia virus) capsid protein |Feline parvovirus [TaxId: 10785]
d1dxea_ : (PHE233) (LYS255) [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |2-dehydro-3-deoxy-galactarate aldolase |Escherichia coli [TaxId: 562]
d2y7ib_ : (TYR106) (LYS128) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d1tjya_ : (SER125) (GLN147) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |AI-2 receptor LsrB |Salmonella typhi [TaxId: 90370]
d3ivaa3 : (ALA1055) (ASP1070) [view usage] : d.173.1.1 |Methionine synthase activation domain-like |Methionine synthase activation domain-like |Methionine synthase SAM-binding domain |Methionine synthase SAM-binding domain |Escherichia coli [TaxId: 562]
d2pkyx_ : (ILE2) (LEU15) [view usage] : c.69.1.8 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloalkane dehalogenase |Haloalkane dehalogenase |Xanthobacter autotrophicus [TaxId: 280]
d2q6za_ : (ASP79) (LEU94) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d2j0na1 : (ASN186) (PRO210) [view usage] : a.250.1.1 |IpaD-like |IpaD-like |IpaD-like |Invasin IpaD |Shigella flexneri [TaxId: 623]
d1ugja_ : (GLU13) (HIS29) [view usage] : b.41.1.3 |PRC-barrel domain |PRC-barrel domain |RIKEN cDNA 2310057j16 protein (KIAA1543) |RIKEN cDNA 2310057j16 protein (KIAA1543) |Mouse (Mus musculus) [TaxId: 10090]
d1xv2a_ : (ASN3) (ALA16) [view usage] : d.290.1.1 |AF0104/ALDC/Ptd012-like |AF0104/ALDC/Ptd012-like |Alpha-acetolactate decarboxylase-like |Hypothetical protein SA2394 |Staphylococcus aureus [TaxId: 1280]
d2ahjb_ : (THR158) (GLY170) [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |Iron-containing nitrile hydratase |Rhodococcus erythropolis [TaxId: 1833]
d3e3kb_ : (ASP70) (ARG95) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d2vwsa_ : (PHE233) (LYS255) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4gpnb_ : (GLY388) (GLY414) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1di0e_ : (ILE86) (GLU106) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
d2m8ca_ : (ASP94) (LYS113) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 536056]
d1gyfa_ : (ASP60) (THR86) [view usage] : d.76.1.1 |GYF/BRK domain-like |GYF domain |GYF domain |GYF domain from cd2bp2 protein |Human (Homo sapiens) [TaxId: 9606]
d2hyec3 : (PHE665) (LYS675) [view usage] : e.40.1.1 |Cullin homology domain |Cullin homology domain |Cullin homology domain |Cullin-4A |Human (Homo sapiens) [TaxId: 9606]
d3e9ua_ : (THR686) (LYS708) [view usage] : b.1.27.0 |Immunoglobulin-like beta-sandwich |CalX-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1di0a_ : (ILE86) (GLU106) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
d1cgie_ : (THR224) (ASN245) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |(alpha,gamma)-chymotrypsin(ogen) |Cow (Bos taurus) [TaxId: 9913]
d1bzaa_ : (LYS271) (ILE285) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TOHO-1 [TaxId: 562]
d2hlsb1 : (PRO88) (ASP121) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Aeropyrum pernix [TaxId: 272557]
d1ylwa_ : (ASN271) (ALA287) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
d1csoe_ : (GLY224) (ALA236) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease B |Streptomyces griseus, strain k1 [TaxId: 1911]
d4kd5d_ : (LEU121) (THR144) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d1ayoa_ : (PHE6) (CYS17) [view usage] : b.1.29.1 |Immunoglobulin-like beta-sandwich |Macroglobulin |Alpha-macroglobulin receptor domain |alpha-2-macroglobulin |Cow (Bos taurus) [TaxId: 9913]
d1i2wb_ : (ASP271) (LEU290) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
d1eyua_ : (ASN140) (GLU151) [view usage] : c.52.1.6 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease PvuII |Restriction endonuclease PvuII |Proteus vulgaris [TaxId: 585]
d2x71a_ : (ASP271) (LEU290) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]
d1rm5a2 : (ASN202) (PRO219) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Spinach (Spinacia oleracea) [TaxId: 3562]
d1gw6a2 : (ALA114) (LYS126) [view usage] : b.98.1.1 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |Leukotriene A4 hydrolase N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3is9a1 : (LYS104) (VAL118) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d4iqdb_ : (GLN235) (GLY262) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3d02a_ : (ASN125) (VAL141) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
d1ygea2 : (ALA4) (GLU21) [view usage] : b.12.1.1 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipoxigenase N-terminal domain |Plant lipoxigenase |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
d1ania_ : (LEU417) (GLY447) [view usage] : c.76.1.1 |Alkaline phosphatase-like |Alkaline phosphatase-like |Alkaline phosphatase |Alkaline phosphatase |Escherichia coli [TaxId: 562]
d1esga_ : (CYS54) (ASN73) [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
d2gfta_ : (LYS26) (GLY40) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Bacillus licheniformis [TaxId: 1402]
d2bera3 : (PRO49) (GLY63) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
d2vlnb_ : (VAL98) (GLY110) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E9 |Escherichia coli [TaxId: 562]
d2ea3a_ : (GLY162) (ALA175) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Cellulomonas bogoriensis [TaxId: 301388]
d1cu1a2 : (ASP285) (THR295) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d1bdaa_ : (ASP223) (ARG243) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Single chain tissue plasminogen activator |Human (Homo sapiens) [TaxId: 9606]
d3oj8b_ : (THR115) (GLN127) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1qpna1 : (ASP265) (VAL276) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
d3mg1a2 : (ASP220) (ARG242) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d4wt7a_ : (LEU144) (GLY167) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d1l9ma1 : (GLN6) (HIS20) [view usage] : b.1.18.9 |Immunoglobulin-like beta-sandwich |E set domains |Transglutaminase N-terminal domain |Transglutaminase N-terminal domain |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d1tm2a_ : (SER125) (GLN147) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |AI-2 receptor LsrB |Salmonella typhi [TaxId: 90370]
d2qtva4 : (PRO627) (LYS649) [view usage] : d.109.2.1 |Gelsolin-like |C-terminal, gelsolin-like domain of Sec23/24 |C-terminal, gelsolin-like domain of Sec23/24 |Sec23 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3a8mb_ : (THR158) (GLY170) [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |Iron-containing nitrile hydratase |Rhodococcus erythropolis [TaxId: 1833]
d4p82a_ : (GLN3) (GLU26) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |automated matches |Bacillus subtilis [TaxId: 224308]
d4mf4a_ : (LEU238) (SER261) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3mg1b2 : (ASP220) (ARG242) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d2j5ih_ : (ALA137) (GLY147) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d4pfqc_ : (ASP34) (LEU50) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Brachybacterium faecium [TaxId: 446465]
d2y7ia_ : (TYR106) (LYS128) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d1dxfa_ : (PHE233) (LYS256) [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |2-dehydro-3-deoxy-galactarate aldolase |Escherichia coli [TaxId: 562]
d2ogac_ : (PHE12) (LEU22) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d1uehb_ : (ARG19) (GLY36) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Escherichia coli [TaxId: 562]
d2ym0a_ : (ASN185) (ASN206) [view usage] : a.250.1.0 |IpaD-like |IpaD-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d3sh7a_ : (ASP271) (LEU290) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
d4l0pa_ : (SER27) (LEU42) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4do3a_ : (THR115) (GLN127) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2xt0a_ : (MET1) (LEU14) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Plesiocystis pacifica [TaxId: 191768]
d2g8la1 : (TYR134) (ALA148) [view usage] : e.50.1.1 |AF1104-like |AF1104-like |AF1104-like |Hypothetical protein PH1575 |Pyrococcus horikoshii [TaxId: 53953]
d3qo9a1 : (LYS104) (SER117) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d2czra1 : (TRP144) (LEU161) [view usage] : c.52.4.1 |Restriction endonuclease-like |TBP-interacting protein-like |TBP-interacting protein-like |TBP-interacting protein |Thermococcus kodakaraensis [TaxId: 311400]
d1v4va_ : (ILE171) (LEU188) [view usage] : c.87.1.3 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-N-acetylglucosamine 2-epimerase |UDP-N-acetylglucosamine 2-epimerase |Thermus thermophilus [TaxId: 274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, e.8, e.3, c.1, c.10, c.67, c.69, c.94, d.68, c.2, c.76, d.58, b.69, b.47, c.117, c.66, c.93, c.14, c.42, e.18,
d.129, c.23, d.144, c.37, c.36, c.7, d.104, c.18, c.47, b.18, b.121, c.87, d.81, b.85, b.1, d.17, c.101, b.21, c.61, c.16,
c.52, b.34, d.168, d.109, b.41, d.85, c.30, d.15, d.4, e.50, b.33, b.98, d.290, e.40, d.101, b.12, g.44, c.114, d.76, d.173,
a.250, b.46, b.111