Tableau information
Concept source: d3c2ua1 amino acid (a.a.) range (VAL46)(LEU55)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: EE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL46) (LEU50) E1
(VAL51) (LEU55) E2
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -47.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4qiia_ : (LYS302) (PHE314) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1e1cb1 : (PHE466) (GLU475) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase beta subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d1nr4a_ : (GLY7) (GLY17) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Thymus and activation-regulated chemokine, TRAC |Human (Homo sapiens) [TaxId: 9606]
d4ra8b_ : (THR7) (ARG18) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oscd_ : (SER4) (THR17) [view usage] : d.58.5.2 |Ferredoxin-like |GlnB-like |Divalent ion tolerance proteins CutA (CutA1) |Mammalian CutA-like protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ueqa_ : (GLY105) (PRO120) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) |Human (Homo sapiens) [TaxId: 9606]
d3kkec_ : (GLY315) (ARG333) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3hn3b3 : (LYS341) (GLU352) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Glucuronidase, domain 3 |Human (Homo sapiens) [TaxId: 9606]
d2dtge3 : (ASN514) (CYS524) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Insulin receptor |Human (Homo sapiens) [TaxId: 9606]
d3oxnb_ : (ASP167) (GLY186) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Vibrio parahaemolyticus [TaxId: 670]
d2proc1 : (GLY59) (ASN83) [view usage] : d.52.1.1 |Alpha-lytic protease prodomain-like |Alpha-lytic protease prodomain |Alpha-lytic protease prodomain |Alpha-lytic protease prodomain |Lysobacter enzymogenes [TaxId: 69]
d2rela_ : (GLY14) (CYS45) [view usage] : g.3.14.1 |Knottins (small inhibitors, toxins, lectins) |Elafin-like |Elafin-like |Elafin, elastase-specific inhibitor |Human (Homo sapiens) [TaxId: 9606]
d2rf8b_ : (LEU76) (VAL85) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
d1vesa_ : (ASN95) (LYS113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Novel antigen receptor 12Y-2 |Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]
d2ouxb2 : (ILE141) (VAL150) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Magnesium transporter MgtE |Enterococcus faecalis [TaxId: 1351]
d4dipc_ : (PRO25) (ILE37) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2zcid1 : (THR87) (PRO105) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1f25a_ : (LYS59) (SER73) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1ak4b_ : (LYS154) (GLU165) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant A [TaxId: 9606]
d1nr4e_ : (GLY7) (GLY17) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Thymus and activation-regulated chemokine, TRAC |Human (Homo sapiens) [TaxId: 9606]
d1a3ab_ : (PHE5) (GLY15) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Phosphotransferase IIa-mannitol |Escherichia coli [TaxId: 562]
d1wpxa_ : (THR89) (SER106) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3stmx_ : (GLY5) (ASN14) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d2jz3b_ : (ASP83) (SER94) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1iqdb1 : (ASP102) (SER113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Human (Homo sapiens), cluster 1 [TaxId: 9606]
d2lroa_ : (GLY6) (GLY24) [view usage] : b.18.1.30 |Galactose-binding domain-like |Galactose-binding domain-like |CBM11 |automated matches |Clostridium thermocellum [TaxId: 203119]
d1f4wh1 : (ASP105) (SER116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
d1tzqa_ : (LYS43) (SER54) [view usage] : b.97.1.1 |Cytolysin/lectin |Cytolysin/lectin |Anemone pore-forming cytolysin |Equinatoxin II (eqtII, tenebrosin C) |European sea anemone (Actinia equina) [TaxId: 6106]
d4p32a_ : (ALA2) (TYR13) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1zl3a2 : (CYS193) (ALA204) [view usage] : d.265.1.2 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase II TruB |Pseudouridine synthase II TruB |Escherichia coli [TaxId: 562]
d1usqa_ : (THR7) (THR31) [view usage] : b.2.3.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Dr-family adhesin |DraA/Afimbrial adhesin Afa-III |Escherichia coli [TaxId: 562]
d1iaza_ : (LYS43) (SER54) [view usage] : b.97.1.1 |Cytolysin/lectin |Cytolysin/lectin |Anemone pore-forming cytolysin |Equinatoxin II (eqtII, tenebrosin C) |European sea anemone (Actinia equina) [TaxId: 6106]
d1pjwa_ : (THR9) (LYS21) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |Envelope glycoprotein |Japanese encephalitis virus [TaxId: 11072]
d4h0ca_ : (MSE1) (GLY12) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Dyadobacter fermentans [TaxId: 471854]
d2proa1 : (GLY59) (ASN83) [view usage] : d.52.1.1 |Alpha-lytic protease prodomain-like |Alpha-lytic protease prodomain |Alpha-lytic protease prodomain |Alpha-lytic protease prodomain |Lysobacter enzymogenes [TaxId: 69]
d3lzea_ : (ASP10) (CYS26) [view usage] : d.96.1.2 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |6-pyruvoyl tetrahydropterin synthase |automated matches |Plasmodium vivax [TaxId: 5855]
d1a0ea_ : (LYS9) (PHE25) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Thermotoga neapolitana [TaxId: 2337]
d1e5ba_ : (SER250) (SER260) [view usage] : b.2.2.1 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family II |Endo-1,4-beta xylanase D, xylan binding domain, XBD |Cellulomonas fimi [TaxId: 1708]
d1lf6a2 : (LYS13) (ASN24) [view usage] : b.30.5.5 |Supersandwich |Galactose mutarotase-like |Bacterial glucoamylase N-terminal domain-like |Bacterial glucoamylase, N-terminal domain |Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]
d1bxsa_ : (LYS328) (ASP346) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Sheep (Ovis aries) [TaxId: 9940]
d1w8xm_ : (ARG30) (ALA41) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
d1qpga_ : (ASP156) (GLY184) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3pxfa_ : (SER-3) (GLU8) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
d1w85c_ : (GLY257) (GLY269) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |Pyruvate dehydrogenase E1-alpha, PdhA |Bacillus stearothermophilus [TaxId: 1422]
d2p97b_ : (THR79) (ASP101) [view usage] : d.157.1.12 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Ava3068-like |Hypothetical protein Ava3068 |Anabaena variabilis [TaxId: 1172]
d2ap9b_ : (TYR125) (ARG141) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |N-acetyl-l-glutamate kinase |Mycobacterium tuberculosis [TaxId: 1773]
d3jz4a_ : (LYS314) (ASP332) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1p1da1 : (GLN18) (ALA31) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Glutamate receptor interacting protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2l67a_ : (GLY5) (ASN14) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d1bwuq_ : (CYS29) (LEU57) [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Garlic (Allium sativum) [TaxId: 4682]
d1nugb2 : (VAL533) (PRO544) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d2tbva_ : (GLY102) (SER119) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Tombusvirus coat protein |TBSV (Tomato bushy stunt virus) [TaxId: 12145]
d4qiid_ : (LYS302) (PHE314) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2zfha_ : (SER61) (THR74) [view usage] : d.58.5.2 |Ferredoxin-like |GlnB-like |Divalent ion tolerance proteins CutA (CutA1) |Mammalian CutA-like protein |Human (Homo sapiens) [TaxId: 9606]
d4i4za_ : (LYS263) (PRO275) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Synechocystis sp. [TaxId: 1111708]
d1nfha_ : (GLY75) (LYS89) [view usage] : d.68.6.1 |IF3-like |AlbA-like |DNA-binding protein AlbA |DNA-binding protein AlbA |Archaeoglobus fulgidus [TaxId: 2234]
d4tx6b_ : (GLY114) (ALA124) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 451804]
d2akmb1 : (SER140) (ASN150) [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Human (Homo sapiens), gamma isoform [TaxId: 9606]
d2x6gp_ : (THR7) (ARG18) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d1s7ia_ : (GLY111) (GLY123) [view usage] : d.58.4.9 |Ferredoxin-like |Dimeric alpha+beta barrel |DGPF domain (Pfam 04946) |Hypothetical protein PA1349 |Pseudomonas aeruginosa [TaxId: 287]
d1b2wh1 : (ALA105) (SER116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Engineered (including hybrid species)
d1j5ua_ : (HIS4) (THR14) [view usage] : d.208.1.1 |MTH1598-like |MTH1598-like |MTH1598-like |Hypothetical protein TM1083 |Thermotoga maritima [TaxId: 2336]
d1kena_ : (THR37) (LYS50) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d2zcia1 : (THR87) (PRO105) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1kelh1 : (ASP107) (VAL117) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 1 [TaxId: 10090]
d3s4te_ : (GLY3) (GLU14) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d1uweh1 : (ASP101) (SER112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d2avfd1 : (ALA5) (LYS21) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Achromobacter cycloclastes [TaxId: 223]
d3qrdc_ : (GLY108) (ASP119) [view usage] : d.17.1.2 |Cystatin-like |Cystatin/monellin |Cystatins |Cystatin C |Human (Homo sapiens) [TaxId: 9606]
d4eeja_ : (GLY6) (ASN15) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2w9ta_ : (ARG57) (SER78) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d2jzta_ : (THR126) (HIS139) [view usage] : c.47.1.20 |Thioredoxin fold |Thioredoxin-like |HyaE-like |Hydrogenase-1 operon protein HyaE |Salmonella typhimurium [TaxId: 90371]
d1a3aa_ : (LEU4) (GLY15) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Phosphotransferase IIa-mannitol |Escherichia coli [TaxId: 562]
d2fjub2 : (THR678) (PHE689) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Phospholipase C-beta-2 |Human (Homo sapiens) [TaxId: 9606]
d3qimb_ : (TYR238) (ALA256) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d1mzka_ : (THR287) (GLU298) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Kinase associated protein phosphatase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1ms0a1 : (ARG577) (ARG599) [view usage] : b.29.1.15 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Trypanosoma sialidase, C-terminal domain |Trypanosoma sialidase, C-terminal domain |Trypanosoma cruzi [TaxId: 5693]
d1orda1 : (SER3) (ALA25) [view usage] : c.23.1.4 |Flavodoxin-like |CheY-like |Ornithine decarboxylase N-terminal "wing" domain |Ornithine decarboxylase N-terminal "wing" domain |Lactobacillus sp., strain 30a [TaxId: 1591]
d4j15a1 : (ASP42) (ALA64) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kked_ : (GLY315) (ARG333) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3ivva_ : (SER26) (THR37) [view usage] : b.8.1.1 |TRAF domain-like |TRAF domain-like |MATH domain |Speckle-type poz protein SPOP |Human (Homo sapiens) [TaxId: 9606]
d1ueoa_ : (ILE11) (GLY24) [view usage] : j.107.1.1 |Penaeidin-3a |Penaeidin-3a |Penaeidin-3a |Penaeidin-3a |Pacific white shrimp (Litopenaeus vannamei) [TaxId: 6689]
d4p32b_ : (ALA2) (TYR13) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1cpja_ : (VAL89) (PRO106) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin B |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1wyda1 : (GLU90) (LYS99) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1zglp1 : (GLU103) (GLU118) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d1scec_ : (ARG99) (GLN109) [view usage] : d.97.1.1 |Cell cycle regulatory proteins |Cell cycle regulatory proteins |Cell cycle regulatory proteins |suc1 |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d2hrua4 : (VAL593) (ARG603) [view usage] : d.139.1.1 |PurM C-terminal domain-like |PurM C-terminal domain-like |PurM C-terminal domain-like |Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 |Thermotoga maritima [TaxId: 2336]
d2b59b2 : (GLY85) (GLY101) [view usage] : b.3.2.2 |Prealbumin-like |Carboxypeptidase regulatory domain-like |Pre-dockerin domain |Cellulosomal scaffolding protein A |Clostridium thermocellum [TaxId: 1515]
d3m0na_ : (ASP10) (CYS26) [view usage] : d.96.1.2 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |6-pyruvoyl tetrahydropterin synthase |automated matches |Plasmodium vivax [TaxId: 5855]
d1yrka_ : (PRO3) (GLY15) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m5sa2 : (ILE155) (GLY163) [view usage] : d.58.33.1 |Ferredoxin-like |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Methanosarcina barkeri [TaxId: 2208]
d4p33a_ : (ALA2) (TYR13) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3mwza_ : (GLY103) (ALA114) [view usage] : d.17.1.0 |Cystatin-like |Cystatin/monellin |automated matches |automated matches |Ixodes scapularis [TaxId: 6945]
d2ywja_ : (ARG129) (SER138) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d3e10b_ : (ILE154) (GLU165) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
d2x6gm_ : (THR7) (ARG18) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d3dyma3 : (LYS347) (HIS357) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1vjza_ : (VAL220) (ARG235) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase homologue TM1752 |Thermotoga maritima [TaxId: 2336]
d2x6gr_ : (THR7) (ARG18) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d2x6gi_ : (THR7) (ARG18) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d2erjb1 : (PHE191) (ARG204) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-2 receptor beta chain |Human (Homo sapiens) [TaxId: 9606]
d1wifa_ : (GLY1) (SER21) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik) |Mouse (Mus musculus) [TaxId: 10090]
d1aela_ : (GLY4) (ASN13) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Intestinal fatty acid binding protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1tijb_ : (ALA58) (ARG70) [view usage] : d.17.1.2 |Cystatin-like |Cystatin/monellin |Cystatins |Cystatin C |Human (Homo sapiens) [TaxId: 9606]
d1npla_ : (CYS29) (MET56) [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Daffodil (Narcissus pseudonarcissus) [TaxId: 39639]
d4jd2h_ : (ARG81) (VAL94) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3a4ya_ : (GLY161) (TYR189) [view usage] : d.157.1.10 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |beta-CASP RNA-metabolising hydrolases |Putative RNA-degradation protein TTHA0252 |Thermus thermophilus [TaxId: 274]
d1qhda2 : (THR245) (ARG255) [view usage] : b.19.1.1 |Viral protein domain |Viral protein domain |Top domain of virus capsid protein |vp6, the major capsid protein of group A rotavirus |Bovine rotavirus [TaxId: 10927]
d4b4da2 : (GLY237) (ARG254) [view usage] : c.25.1.0 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1xhja_ : (GLY28) (ASP37) [view usage] : d.52.8.1 |Alpha-lytic protease prodomain-like |Fe-S cluster assembly (FSCA) domain-like |NifU C-terminal domain-like |Nitrogen fixation protein NifU homolog SE0630 |Staphylococcus epidermidis [TaxId: 1282]
d2u2fa_ : (GLY40) (VAL51) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor U2AF 65 KDa subunit |Human (Homo sapiens) [TaxId: 9606]
d2vnkb2 : (GLY249) (LYS265) [view usage] : c.25.1.0 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |automated matches |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d2xzmg_ : (LYS16) (ASP26) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2dvta1 : (GLY3) (PRO14) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |Thermophilic reversible gamma-resorcylate decarboxylase |Rhizobium sp. MTP-10005 [TaxId: 267998]
d3s4tb_ : (GLY3) (GLU14) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d2cjtc_ : (SER2) (ASP14) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1cpya_ : (THR89) (SER106) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |Serine carboxypeptidase II |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2poaa_ : (GLY6) (ASN15) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d1gc1h1 : (LYS116) (THR127) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Human (Homo sapiens), cluster 1 [TaxId: 9606]
d2lbaa_ : (GLY4) (ASN13) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4diph_ : (PRO25) (ILE37) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gkca_ : (GLY6) (ASN15) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xhsa_ : (MET1) (GLY26) [view usage] : d.269.1.1 |Gamma-glutamyl cyclotransferase-like |Gamma-glutamyl cyclotransferase-like |Gamma-glutamyl cyclotransferase-like |Hypothetical protein YtfP |Escherichia coli [TaxId: 562]
d4fdma_ : (ASP334) (GLY352) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Bacillus sp. [TaxId: 307644]
d1x9la_ : (THR99) (GLY113) [view usage] : b.2.10.1 |Common fold of diphtheria toxin/transcription factors/cytochrome f |DR1885-like metal-binding protein |DR1885-like metal-binding protein |Hypothetical protein DR1885 |Deinococcus radiodurans [TaxId: 1299]
d3amra_ : (TYR167) (ASN179) [view usage] : b.68.3.1 |6-bladed beta-propeller |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |automated matches |Bacillus subtilis [TaxId: 1423]
d1bfvh_ : (ASP107) (SER119) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
d3oska_ : (TYR104) (ASP118) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2v94a1 : (MSE1) (LYS12) [view usage] : d.12.1.3 |Ribosomal proteins S24e, L23 and L15e |Ribosomal proteins S24e, L23 and L15e |Ribosomal protein S24e |Ribosomal protein S24e |Pyrococcus abyssi [TaxId: 29292]
d1xbra_ : (LYS143) (ASN159) [view usage] : b.2.5.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |T-box |T domain from Brachyury transcription factor |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1nr4g_ : (GLY7) (GLY17) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Thymus and activation-regulated chemokine, TRAC |Human (Homo sapiens) [TaxId: 9606]
d1u0aa_ : (PHE6) (GLY23) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Paenibacillus macerans [TaxId: 44252]
d2bs71_ : (THR163) (THR177) [view usage] : b.2.3.5 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |F17c-type adhesin |automated matches |Escherichia coli [TaxId: 562]
d1ooyb2 : (GLU234) (LYS247) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2bcmc_ : (THR7) (ALA31) [view usage] : b.2.3.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3cnvc_ : (ARG115) (ARG125) [view usage] : d.190.1.2 |Chorismate lyase-like |Chorismate lyase-like |UTRA domain |Putative transcriptional regulator BB3683 |Bordetella bronchiseptica [TaxId: 518]
d1wuba_ : (MET1) (ARG17) [view usage] : b.61.6.1 |Streptavidin-like |YceI-like |YceI-like |Polyisoprenoid-binding protein TTHA0802 (TT1927B) |Thermus thermophilus [TaxId: 274]
d1wuba_ : (GLU159) (PRO172) [view usage] : b.61.6.1 |Streptavidin-like |YceI-like |YceI-like |Polyisoprenoid-binding protein TTHA0802 (TT1927B) |Thermus thermophilus [TaxId: 274]
d1ny711 : (ASP9) (SER18) [view usage] : b.121.4.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Comoviridae-like VP |Comovirus coat proteins (VP37 and VP23) |CPMV (Cowpea mosaic virus) [TaxId: 12264]
d3ckma1 : (ASN555) (TYR565) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |YraM C-terminal domain |Haemophilus influenzae [TaxId: 727]
d2djka1 : (LYS117) (GLU129) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Fungus (Humicola insolens) [TaxId: 34413]
d2x6gb_ : (THR7) (ARG18) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d1pdpa_ : (MET272) (ILE284) [view usage] : i.19.1.1 |Bacteriophage T4 3D cryo-EM reconstruction |Bacteriophage T4 3D cryo-EM reconstruction |Bacteriophage T4 3D cryo-EM reconstruction |Bacteriophage T4 3D cryo-EM reconstruction |Bacteriophage T4 [TaxId: 10665]
d1yzhb_ : (ARG111) (LYS122) [view usage] : c.66.1.53 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TrmB-like |tRNA (guanine-N(7)-)-methyltransferase TrmB |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4i42a_ : (LYS273) (PRO285) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4jaja_ : (ARG126) (ARG137) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Aurora-related kinase 1 (aurora-2) |Human (Homo sapiens) [TaxId: 9606]
d1jyna5 : (LYS347) (HIS357) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Galactosidase, domain 3 |Escherichia coli [TaxId: 562]
d1udxa1 : (ASP4) (LYS26) [view usage] : b.117.1.1 |Obg-fold |Obg GTP-binding protein N-terminal domain |Obg GTP-binding protein N-terminal domain |Obg GTP-binding protein N-terminal domain |Thermus thermophilus [TaxId: 274]
d2k2ga_ : (HIS112) (ASP124) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
d2dvtb_ : (GLY3) (PRO14) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |Thermophilic reversible gamma-resorcylate decarboxylase |Rhizobium sp. MTP-10005 [TaxId: 267998]
d1yzha1 : (ARG111) (LYS122) [view usage] : c.66.1.53 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TrmB-like |tRNA (guanine-N(7)-)-methyltransferase TrmB |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2cxfa1 : (ASP237) (ASP246) [view usage] : a.256.1.1 |RUN domain-like |RUN domain-like |RUN domain |Rap2 interacting protein X (RUFY3) |Mouse (Mus musculus) [TaxId: 10090]
d1nfdf2 : (THR115) (THR131) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Chinese hamster (Cricetulus griseus) [TaxId: 10029]
d2x6ga_ : (THR7) (ARG18) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d3k3qa_ : (ASP128) (SER140) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Llama (Lama glama) [TaxId: 9844]
d2dw6a1 : (LYS143) (GLY155) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Bradyrhizobium japonicum [TaxId: 375]
d1m4xa_ : (ASN36) (GLY48) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PBCV-1 virus capsid, quasi-atomic model |Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]
d2x6gk_ : (THR7) (ARG18) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d1i8ib_ : (ASP408) (SER419) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
d1uf4a_ : (ILE5) (ARG16) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium sp. [TaxId: 361]
d1euma_ : (GLY65) (ALA78) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Non-hem ferritin |Escherichia coli, FtnA [TaxId: 562]
d1tzzb1 : (LYS2146) (GLY2157) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Hypothetical protein Bll6730 |Bradyrhizobium japonicum [TaxId: 375]
d1a8pa2 : (GLY236) (ARG253) [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |Ferredoxin reductase (flavodoxin reductase) |Azotobacter vinelandii [TaxId: 354]
d1ixcb2 : (HIS142) (ILE160) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |LysR-type regulatory protein CbnR |Ralstonia eutropha [TaxId: 106590]
d2ouxa2 : (ILE141) (VAL150) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Magnesium transporter MgtE |Enterococcus faecalis [TaxId: 1351]
d4dyea1 : (MET0) (ASN17) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d1pdya1 : (ASP140) (GLY155) [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |European lobster (Homarus vulgaris) [TaxId: 6707]
d3iifa_ : (ASP181) (SER190) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |Histone macro-H2a1.1 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, c.1, b.19, c.69, c.94, a.104, d.68, d.58, i.1, b.29, c.82, b.67, b.30, d.157, c.66, d.92, c.124, c.93, c.14, i.6,
c.23, d.144, b.40, c.37, c.36, c.47, c.86, d.153, b.60, b.18, b.121, d.3, b.2, d.96, b.6, c.71, d.160, b.1, c.73, a.25,
d.17, c.109, c.25, d.37, c.50, b.62, b.26, d.90, d.109, d.139, b.61, b.97, d.15, b.7, b.3, d.54, d.26, b.36, d.112, d.52,
d.265, d.9, d.12, g.3, b.8, d.97, i.19, b.78, b.117, d.190, d.208, d.269, a.256, j.107