Tableau information
Concept source: d2c6ha_ amino acid (a.a.) range (GLY306)(LEU319)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: EE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY306) (PRO310) E1
(ASP313) (LEU319) E2
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -126.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2efga1 : (GLU367) (GLY379) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor G (EF-G), domain II |Thermus thermophilus [TaxId: 274]
d1hcda_ : (ASN3) (GLY18) [view usage] : b.42.5.2 |beta-Trefoil |Actin-crosslinking proteins |Histidine-rich actin-binding protein (hisactophilin) |Histidine-rich actin-binding protein (hisactophilin) |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d3kkeb_ : (ASN147) (LEU159) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3tioa_ : (VAL4) (GLN17) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3pgla_ : (VAL102) (ASN111) [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d6r1ra2 : (PRO445) (CYS462) [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
d2kg2a_ : (THR10) (GLY34) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4f8ea1 : (GLY45) (VAL56) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3m2la_ : (SER159) (VAL169) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |Alpha-hemolysin |Staphylococcus aureus [TaxId: 1280]
d2wfra_ : (GLN39) (PRO50) [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3cu2b_ : (LEU42) (VAL57) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Histophilus somni [TaxId: 205914]
d1kj1d_ : (ASN2) (ALA12) [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Garlic (Allium sativum) [TaxId: 4682]
d2h6la1 : (PHE106) (GLY122) [view usage] : d.290.1.3 |AF0104/ALDC/Ptd012-like |AF0104/ALDC/Ptd012-like |AF0104-like |Hypothetical protein AF0104 |Archaeoglobus fulgidus [TaxId: 2234]
d2co2a_ : (PRO124) (GLY141) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |automated matches |Salmonella enterica [TaxId: 28901]
d1hzja_ : (ASN187) (GLN202) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Human (Homo sapiens) [TaxId: 9606]
d1xe1a_ : (GLY95) (GLN107) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Hypothetical protein PF0907 |Pyrococcus furiosus [TaxId: 2261]
d4jz6a_ : (CYS352) (HIS368) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1ltea_ : (LYS55) (PHE74) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Coral tree (Erythrina corallodendron) [TaxId: 3843]
d1v1ia1 : (THR375) (SER386) [view usage] : b.83.1.1 |Triple beta-spiral |Fibre shaft of virus attachment proteins |Adenovirus |Adenovirus |Human adenovirus type 2 [TaxId: 10515]
d2egkd_ : (GLY151) (GLY164) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1fpxa2 : (LEU227) (GLY238) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Isoflavone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1m7sb_ : (THR302) (LEU318) [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Pseudomonas syringae [TaxId: 317]
d3eb2a_ : (LEU104) (ASP115) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d3tiof_ : (VAL4) (GLN17) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3u5ce_ : (LYS75) (PHE86) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d1x6ga_ : (CYS24) (ARG37) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2zjoa2 : (VAL329) (ALA340) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |automated matches |Hepatitis c virus (isolate taiwan) [TaxId: 31645]
d1luzb_ : (TYR6) (LYS16) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Viral structural mimic of eIF2alpha |Vaccinia virus [TaxId: 10245]
d4gidc_ : (ARG399) (PRO421) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d1fjda_ : (PRO102) (GLY129) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Parvulin |Human (Homo sapiens), hpar14 [TaxId: 9606]
d4fo7a_ : (GLY191) (ASN207) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2pcqa_ : (PHE122) (PRO135) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1g59a2 : (PRO174) (TYR187) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutamyl-tRNA synthetase (GluRS) |Thermus thermophilus [TaxId: 274]
d1e5ga2 : (VAL69) (TYR85) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement control protein |Vaccinia virus [TaxId: 10245]
d2hd3d_ : (ALA41) (THR51) [view usage] : b.40.15.1 |OB-fold |EutN/CcmL-like |EutN/CcmL-like |Ethanolamine utilization protein EutN |Escherichia coli [TaxId: 562]
d3tiod_ : (VAL4) (GLN17) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2anea1 : (PRO12) (PRO23) [view usage] : b.122.1.10 |PUA domain-like |PUA domain-like |LON domain-like |ATP-dependent protease La (Lon), N-terminal domain |Escherichia coli [TaxId: 562]
d3v64b_ : (LEU1759) (LEU1773) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1rlfa_ : (SER648) (VAL665) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |RalGDS-like factor, Rlf |Mouse (Mus musculus) [TaxId: 10090]
d1od2a2 : (GLU2013) (VAL2024) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1fnxh2 : (LEU186) (LYS201) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Hu antigen C (Huc) |Mouse (Mus musculus) [TaxId: 10090]
d2aeua1 : (LEU143) (GLU157) [view usage] : c.67.1.8 |PLP-dependent transferase-like |PLP-dependent transferases |SelA-like |Hypothetical protein MJ0158 |Methanococcus jannaschii [TaxId: 2190]
d3pn1a_ : (GLY229) (THR239) [view usage] : d.142.2.0 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |automated matches |automated matches |Haemophilus influenzae [TaxId: 727]
d2a6pa_ : (GLY22) (ASP34) [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2pcfb_ : (GLY210) (PRO248) [view usage] : i.4.1.1 |Electron transport chains |Electron transport chains |Electron transport chains |Cytochrome f-plastocyanin complex |Plant (Spinacia oleracea) and (Brassica rapa) [TaxId: 3562]
d3cu2a_ : (LEU42) (VAL57) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Histophilus somni [TaxId: 205914]
d3m4da_ : (SER159) (VAL169) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |Alpha-hemolysin |Staphylococcus aureus [TaxId: 1280]
d2iq7f_ : (GLY282) (GLY306) [view usage] : b.80.1.3 |Single-stranded right-handed beta-helix |Pectin lyase-like |Galacturonase |automated matches |Colletotrichum lupini [TaxId: 145971]
d1e10a_ : (ALA72) (ASP83) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Halobacterium halobium [TaxId: 2242]
d3az8f_ : (LYS180) (SER200) [view usage] : d.38.1.6 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |FabZ-like |(3R)-hydroxymyristoyl ACP dehydrase FabZ |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3vdua_ : (GLY100) (ILE122) [view usage] : e.49.1.1 |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Recombination protein RecR |Thermoanaerobacter tengcongensis [TaxId: 273068]
d1eh9a2 : (TYR547) (LYS557) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Glycosyltrehalose trehalohydrolase |Sulfolobus solfataricus, km1 [TaxId: 2287]
d1heib2 : (VAL329) (THR343) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d3bboh1 : (ARG79) (GLY97) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d1jiba3 : (ASP159) (GLY169) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
d2pfma_ : (GLU255) (SER264) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1xiba_ : (GLN21) (PRO36) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
d1wk9a_ : (LYS289) (GLU303) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |automated matches |Thermus thermophilus [TaxId: 274]
d1uu2b_ : (VAL134) (PRO145) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d2qzfa1 : (GLN1002) (GLU1018) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
d1vrsc_ : (ILE46) (ALA56) [view usage] : b.1.17.1 |Immunoglobulin-like beta-sandwich |Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) |Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) |Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) |Escherichia coli [TaxId: 562]
d3rvba2 : (VAL329) (ALA340) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d2jd4a1 : (GLY2697) (PRO2712) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1te1b_ : (GLN0) (GLY8) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Penicillium funiculosum [TaxId: 28572]
d1dwob_ : (ALA99) (THR110) [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
d4gv8d_ : (LEU5) (HIS21) [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 12360]
d3hq6a2 : (ALA256) (PRO270) [view usage] : a.3.1.0 |Cytochrome c |Cytochrome c |automated matches |automated matches |Geobacter sulfurreducens [TaxId: 35554]
d1c4rb_ : (ASN278) (GLY289) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Ligand-binding domain of neurexin 1beta |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3gbva_ : (ASP158) (GLY171) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d3l0ya_ : (VAL102) (ASN111) [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kked_ : (ASN147) (LEU159) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1d6qa_ : (TRP64) (CYS77) [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
d1a0sp_ : (ASP191) (ALA206) [view usage] : f.4.3.2 |Transmembrane beta-barrels |Porins |Maltoporin-like |Sucrose-specific porin |Salmonella typhimurium [TaxId: 90371]
d4amha_ : (GLY54) (GLU66) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2isba_ : (PRO165) (LEU177) [view usage] : c.8.9.1 |The "swivelling" beta/beta/alpha domain |FumA C-terminal domain-like |FumA C-terminal domain-like |Fumarate hydratase class I beta subunit |Archaeoglobus fulgidus [TaxId: 2234]
d1u3ba2 : (PRO108) (ASN129) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) |Human (Homo sapiens) [TaxId: 9606]
d2h2ca_ : (HIS16) (GLY40) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qnla_ : (PHE111) (GLY121) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Amide receptor/negative regulator of the amidase operon (AmiC) |Pseudomonas aeruginosa [TaxId: 287]
d4amhb_ : (GLY54) (GLU66) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d09b1 : (GLN8) (HIS20) [view usage] : d.58.2.1 |Ferredoxin-like |Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |Aspartate carbamoyltransferase |Escherichia coli [TaxId: 562]
d4rk0b_ : (GLN157) (THR169) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d3htna_ : (LEU149) (SER165) [view usage] : d.290.1.0 |AF0104/ALDC/Ptd012-like |AF0104/ALDC/Ptd012-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d1i3ka_ : (ASN187) (GLN202) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Human (Homo sapiens) [TaxId: 9606]
d3l0ca_ : (VAL102) (ASN111) [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xtqa1 : (ALA62) (GLN72) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |GTP-binding protein RheB |Human (Homo sapiens) [TaxId: 9606]
d3eb2d_ : (LEU104) (ASP115) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d1peaa_ : (PHE111) (GLY121) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Amide receptor/negative regulator of the amidase operon (AmiC) |Pseudomonas aeruginosa [TaxId: 287]
d4v1ai_ : (HIS217) (ASP237) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d1v43a2 : (HIS343) (ASP357) [view usage] : b.40.6.3 |OB-fold |MOP-like |ABC-transporter additional domain |Hypothetical protein PH0022, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d1flcb_ : (LEU7) (GLU18) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza C virus [TaxId: 11552]
d3v64a_ : (GLU1760) (LEU1773) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1z92b2 : (ARG117) (CYS131) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-2 receptor alpha chain |Human (Homo sapiens) [TaxId: 9606]
d1vhha_ : (LYS39) (PRO50) [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |Sonic hedgehog |Mouse (Mus musculus) [TaxId: 10090]
d1cvma_ : (GLN292) (ASP312) [view usage] : b.68.3.1 |6-bladed beta-propeller |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |Bacillus amyloliquefaciens [TaxId: 1390]
d3v60b2 : (PRO184) (ASP200) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1i3kb_ : (ASN187) (GLN202) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Human (Homo sapiens) [TaxId: 9606]
d1z3ix1 : (GLN477) (GLN487) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Rad54-like, Rad54L |Zebrafish (Danio rerio) [TaxId: 7955]
d2jd4b1 : (GLY2697) (PRO2712) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2k7va_ : (ASP63) (MET72) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2m5ta_ : (ASP50) (ASP75) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Rhinovirus c [TaxId: 463676]
d3ukva_ : (ALA698) (LYS714) [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1e0fj_ : (GLN30) (SER45) [view usage] : g.3.15.2 |Knottins (small inhibitors, toxins, lectins) |Leech antihemostatic proteins |Hirudin-like |Haemadin |Indian leech (Haemadipsa sylvestris) [TaxId: 13555]
d1gydb_ : (VAL144) (ILE157) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |alpha-L-arabinanase |Cellvibrio cellulosa [TaxId: 155077]
d2cp6a1 : (ILE32) (ILE41) [view usage] : b.34.10.1 |SH3-like barrel |Cap-Gly domain |Cap-Gly domain |Restin |Human (Homo sapiens) [TaxId: 9606]
d3r3ra_ : (THR4) (GLN17) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d4jsha_ : (GLY325) (GLY333) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3puve_ : (ASP164) (VAL183) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1hfua1 : (ALA1) (ASN13) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
d1s02a_ : (VAL198) (GLY219) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Subtilisin |Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
d4fo8a_ : (GLY191) (ASN207) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3ppha1 : (PRO132) (LYS141) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d1fp2a2 : (LEU227) (GLY238) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |Isoflavone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d2b46x_ : (SER134) (PHE146) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d3tb6a_ : (ASN170) (THR182) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2qlpf_ : (HIS50) (GLU59) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
d4wuta_ : (ASP114) (ALA130) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d1ojva1 : (GLN2) (GLU18) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
d3meza_ : (ASN3) (HIS12) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Crocus vernus [TaxId: 87752]
d3d0ga_ : (LEU333) (VAL343) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme 2, ACE2 |Paguma larvata
d2a5za1 : (GLY163) (SER180) [view usage] : b.29.1.24 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SO2946-like |Hypothetical protein SO2946 |Shewanella oneidensis [TaxId: 70863]
d2yeza1 : (GLU1) (PHE22) [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1jssa_ : (GLY144) (PRO168) [view usage] : d.129.3.2 |TBP-like |Bet v1-like |STAR domain |Cholesterol-regulated Start protein 4 (Stard4). |Mouse (Mus musculus) [TaxId: 10090]
d2w4fa_ : (GLU725) (GLY744) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f94a_ : (LYS41) (THR57) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Bucandin |Malayan krait (Bungarus candidus) [TaxId: 92438]
d4fo8c_ : (GLY191) (ASN207) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3emda_ : (PRO136) (SER152) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]
d1jcmp_ : (LYS179) (ASN196) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Indole-3-glycerophosphate synthase, IPGS |Escherichia coli [TaxId: 562]
d7r1ra2 : (PRO445) (CYS462) [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
d1oh2q_ : (ASP191) (ALA206) [view usage] : f.4.3.2 |Transmembrane beta-barrels |Porins |Maltoporin-like |Sucrose-specific porin |Salmonella typhimurium [TaxId: 90371]
d2a5zc_ : (GLY163) (SER180) [view usage] : b.29.1.24 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SO2946-like |Hypothetical protein SO2946 |Shewanella oneidensis [TaxId: 70863]
d4fo7b_ : (GLY191) (ASN207) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1gyka_ : (GLY6) (PRO25) [view usage] : b.29.1.5 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Pentraxin (pentaxin) |Serum amyloid P component (SAP) |Human (Homo sapiens) [TaxId: 9606]
d1gyka_ : (ASN189) (PRO200) [view usage] : b.29.1.5 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Pentraxin (pentaxin) |Serum amyloid P component (SAP) |Human (Homo sapiens) [TaxId: 9606]
d1daba_ : (ALA191) (GLY203) [view usage] : b.80.1.7 |Single-stranded right-handed beta-helix |Pectin lyase-like |Virulence factor P.69 pertactin |Virulence factor P.69 pertactin |Bordetella pertussis [TaxId: 520]
d1daba_ : (LEU379) (GLY391) [view usage] : b.80.1.7 |Single-stranded right-handed beta-helix |Pectin lyase-like |Virulence factor P.69 pertactin |Virulence factor P.69 pertactin |Bordetella pertussis [TaxId: 520]
d1vava_ : (GLY40) (GLU64) [view usage] : b.29.1.18 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Alginate lyase |Alginate lyase PA1167 |Pseudomonas aeruginosa [TaxId: 287]
d1bhea_ : (SER365) (LYS376) [view usage] : b.80.1.3 |Single-stranded right-handed beta-helix |Pectin lyase-like |Galacturonase |Polygalacturonase |Erwinia carotovora, subsp. carotovora [TaxId: 554]
d1d0cb_ : (PRO95) (GLY103) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Cow (Bos taurus) [TaxId: 9913]
d3mizb_ : (ASN145) (PRO159) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhizobium etli [TaxId: 347834]
d3eb2b_ : (LEU104) (ASP115) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d1pooa_ : (GLN292) (ASP312) [view usage] : b.68.3.1 |6-bladed beta-propeller |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |Bacillus amyloliquefaciens [TaxId: 1390]
d2ghwc_ : (THR332) (SER346) [view usage] : d.318.1.1 |SARS receptor-binding domain-like |SARS receptor-binding domain-like |SARS receptor-binding domain-like |Spike protein S1 |SARS coronavirus [TaxId: 227859]
d1rpxa_ : (ILE40) (ILE55) [view usage] : c.1.2.2 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |D-ribulose-5-phosphate 3-epimerase |D-ribulose-5-phosphate 3-epimerase |Potato (Solanum tuberosum) [TaxId: 4113]
d1te5a_ : (ASN235) (TRP248) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Hypothetical protein YafJ (PA1307) |Pseudomonas aeruginosa [TaxId: 287]
d3rota_ : (ASP112) (GLY128) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d3n9ia_ : (ALA196) (LEU221) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Yersinia pestis [TaxId: 214092]
d3it9d1 : (ASN140) (THR157) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d4f82a_ : (HIS-2) (ALA11) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1uu1b_ : (VAL134) (PRO145) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d4ooub_ : (GLY365) (SER378) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Cryptopygus antarcticus [TaxId: 187623]
d1b09a_ : (TYR192) (PRO202) [view usage] : b.29.1.5 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Pentraxin (pentaxin) |C-reactive protein (CRP) |Human (Homo sapiens) [TaxId: 9606]
d1c0ma2 : (PRO52) (PRO69) [view usage] : c.55.3.2 |Ribonuclease H-like motif |Ribonuclease H-like |Retroviral integrase, catalytic domain |Retroviral integrase, catalytic domain |Rous sarcoma virus RSV [TaxId: 11886]
d1jqja1 : (GLU50) (PRO65) [view usage] : d.131.1.1 |DNA clamp |DNA clamp |DNA polymerase III, beta subunit |DNA polymerase III, beta subunit |Escherichia coli [TaxId: 562]
d3fj5a_ : (GLY116) (TYR131) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4qjna_ : (PHE47) (ALA73) [view usage] : a.55.1.0 |IHF-like DNA-binding proteins |IHF-like DNA-binding proteins |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d3mezc_ : (ASN3) (HIS12) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Crocus vernus [TaxId: 87752]
d3k7hb_ : (LYS43) (PRO54) [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d5r1ra2 : (PRO445) (CYS462) [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
d4omna_ : (GLY116) (TYR131) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1hfha2 : (LEU64) (HIS79) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Factor H, 15th and 16th modules |Human (Homo sapiens) [TaxId: 9606]
d1u1ha1 : (ASN116) (TYR132) [view usage] : c.1.22.2 |TIM beta/alpha-barrel |UROD/MetE-like |Cobalamin-independent methionine synthase |5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3tb6b_ : (ASN170) (THR182) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3tr4c_ : (LEU4) (ILE18) [view usage] : b.40.5.0 |OB-fold |Inorganic pyrophosphatase |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]
d2gp5a_ : (THR173) (HIS188) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d2xjva_ : (THR26) (GLY38) [view usage] : b.179.1.2 |Anthrax protective antigen N-terminal-like |PA14-like |GLEYA domain |GLEYA domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1em2a_ : (TYR360) (PRO385) [view usage] : d.129.3.2 |TBP-like |Bet v1-like |STAR domain |Lipid transport domain of Mln64 |Human (Homo sapiens) [TaxId: 9606]
d4pt4a_ : (GLU51) (PRO73) [view usage] : a.55.1.0 |IHF-like DNA-binding proteins |IHF-like DNA-binding proteins |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3e77a_ : (VAL149) (PHE164) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gp5b_ : (THR173) (HIS188) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d4ompa_ : (GLY116) (TYR131) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4l6pc2 : (PRO184) (ASP200) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.80, e.5, e.3, c.1, b.82, c.67, c.69, b.81, c.94, a.104, c.2, d.58, i.1, c.108, b.29, c.82, c.26, b.67, b.47,
c.66, d.92, c.93, c.14, a.127, b.50, d.129, f.4, b.40, c.37, c.7, c.47, c.55, d.2, d.153, d.127, c.60, d.174, b.2, b.6,
b.85, b.122, b.1, b.42, c.8, c.41, d.38, b.179, b.84, d.19, c.61, d.142, d.131, b.34, h.3, a.3, d.65, d.15, b.43, a.55,
b.51, d.26, b.71, e.49, b.36, g.18, d.290, g.7, f.6, d.318, g.3, b.83, i.4, b.78