Tableau information
Concept source: d4leob1 amino acid (a.a.) range (ASP1)(SER14)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: EE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP1) (SER7) E1
(ASP9) (SER14) E2
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 31.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fgqx_ : (ALA300) (PHE332) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |automated matches |Delftia acidovorans [TaxId: 80866]
d1ftra2 : (GLY150) (THR162) [view usage] : d.58.33.1 |Ferredoxin-like |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Formylmethanofuran:tetrahydromethanopterin formyltransferase |Methanopyrus kandleri [TaxId: 2320]
d2xzm7_ : (LYS93) (GLU103) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1bev3_ : (ASP27) (PRO37) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Bovine enterovirus coat proteins |Bovine enterovirus, VG-5-27 [TaxId: 12064]
d2jlea1 : (GLY213) (PRO226) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d2jlea1 : (GLU312) (SER322) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d3irxa1 : (PRO313) (SER322) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1zbpa1 : (LEU240) (GLU263) [view usage] : e.61.1.1 |ImpE-like |ImpE-like |ImpE-like |Hypothetical protein VPA1032 |Vibrio parahaemolyticus [TaxId: 670]
d1frfl_ : (LYS40) (GLY51) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio fructosovorans [TaxId: 878]
d2db8a_ : (GLY89) (SER102) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gwza_ : (ASP199) (SER207) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d4dj6e_ : (SER11) (VAL33) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/netherlands/219/2003(h7n7)) [TaxId: 680693]
d4gwsa_ : (ASP199) (SER207) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d4pdwc_ : (ASN27) (PRO37) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Human rhinovirus 14 [TaxId: 12131]
d4k44a_ : (ARG753) (ILE764) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Phospholipase C-gamma-1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2erjc1 : (THR32) (VAL42) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Cytokine receptor common gamma chain |Human (Homo sapiens) [TaxId: 9606]
d4bnqb_ : (THR63) (PHE74) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 46170]
d1vdha_ : (HIS10) (PHE26) [view usage] : d.58.4.10 |Ferredoxin-like |Dimeric alpha+beta barrel |Chlorite dismutase-like |Polyketide synthase CurD homologue TTHA1714/TTC1352 |Thermus thermophilus [TaxId: 274]
d1vdha_ : (SER105) (GLU118) [view usage] : d.58.4.10 |Ferredoxin-like |Dimeric alpha+beta barrel |Chlorite dismutase-like |Polyketide synthase CurD homologue TTHA1714/TTC1352 |Thermus thermophilus [TaxId: 274]
d3fwfa_ : (ILE395) (TRP406) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-CAM |Pseudomonas putida [TaxId: 303]
d4uo4a_ : (PHE125) (LYS156) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
d2dpta_ : (ARG2) (ALA28) [view usage] : d.108.1.6 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |LFTR-like |automated matches |Escherichia coli [TaxId: 562]
d1kdga2 : (ASN513) (PRO527) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
d1xeua1 : (GLU187) (LEU213) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d4n6da_ : (THR143) (LYS155) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio salexigens [TaxId: 526222]
d1t0tv_ : (GLN6) (TRP22) [view usage] : d.58.4.10 |Ferredoxin-like |Dimeric alpha+beta barrel |Chlorite dismutase-like |YwfI homologue |Bacillus stearothermophilus [TaxId: 1422]
d1pm6a_ : (THR57) (LYS68) [view usage] : a.6.1.7 |Putative DNA-binding domain |Putative DNA-binding domain |Excisionase-like |Excisionase Xis |Bacteriophage lambda [TaxId: 10710]
d2eywa_ : (GLU188) (SER198) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1chua1 : (THR524) (PRO533) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |L-aspartate oxidase |Escherichia coli [TaxId: 562]
d4cpla_ : (LEU454) (ALA464) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Influenza b virus (b/brisbane/60/2008) [TaxId: 604436]
d1ui7a1 : (ASP266) (ILE277) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d1gxbd2 : (ASN73) (GLY108) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
d1a4ga_ : (LEU454) (ALA464) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza B virus, different strains [TaxId: 11520]
d2uusa_ : (LYS105) (PRO136) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1i3rb2 : (LYS2) (GLY15) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-EK [TaxId: 10090]
d4cpoa_ : (LEU454) (ALA464) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Influenza B virus [TaxId: 11520]
d1anfa_ : (ALA105) (ASN118) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1nzca_ : (ASN70) (PRO79) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Streptococcus suis [TaxId: 1307]
d1e57c_ : (THR169) (LYS182) [view usage] : b.121.4.6 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tymoviridae-like VP |Tymovirus coat protein |PHMV (Physalis mottle virus) [TaxId: 72539]
d3pzva_ : (ASN161) (GLY172) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d1fsaa_ : (ASN199) (SER207) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d4m1ra_ : (ASN124) (GLN135) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Soil metagenome [TaxId: 410658]
d2fgra_ : (ALA300) (PHE332) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |automated matches |Delftia acidovorans [TaxId: 80866]
d1smvc_ : (SER47) (ARG64) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Sobemovirus coat protein |SMV (Sesbania mosaic virus) [TaxId: 12558]
d1g61a_ : (ASN2092) (LYS2103) [view usage] : d.126.1.1 |Pentein, beta/alpha-propeller |Pentein |Ribosome anti-association factor eIF6 (aIF6) |Ribosome anti-association factor eIF6 (aIF6) |Methanococcus jannaschii [TaxId: 2190]
d4ra0c2 : (GLY205) (LEU217) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pt0b_ : (MET1) (ARG12) [view usage] : b.52.2.1 |Double psi beta-barrel |ADC-like |Pyruvoyl dependent aspartate decarboxylase, ADC |Pyruvoyl dependent aspartate decarboxylase, ADC |Escherichia coli [TaxId: 562]
d1opea2 : (ALA142) (GLU152) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d3rzue_ : (GLY327) (THR339) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |Catalytic domain of AMSH |Human (Homo sapiens) [TaxId: 9606]
d2oqhb2 : (ASP126) (ARG136) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
d2io4b1 : (PRO113) (PRO123) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d2f8sa1 : (GLY302) (ALA312) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |automated matches |Aquifex aeolicus [TaxId: 63363]
d3sjna1 : (VAL1) (VAL14) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Shewanella pealeana [TaxId: 398579]
d1zq1a2 : (GLU78) (PRO89) [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD |Pyrococcus abyssi [TaxId: 29292]
d1oaoa_ : (ASN415) (VAL428) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit |Moorella thermoacetica [TaxId: 1525]
d4unwc_ : (PHE125) (LYS156) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/eq/newmarket/93/(h3n8)) [TaxId: 159470]
d1mg1a1 : (SER256) (ALA270) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d4gmsa_ : (PHE125) (LYS156) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1avka1 : (ASP266) (ILE277) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d4sbvc_ : (MET52) (MET64) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Sobemovirus coat protein |SBMV (Southern bean mosaic virus), cow pea strain [TaxId: 12139]
d2avnb_ : (GLY192) (PRO207) [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical methyltransferase TM1389 |Thermotoga maritima [TaxId: 2336]
d1napa_ : (GLU22) (SER32) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Platelet basic protein, PBP |Human (Homo sapiens) [TaxId: 9606]
d4mzea_ : (ASP188) (ASP200) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Human parainfluenza 3 virus [TaxId: 11217]
d2fwua1 : (ARG633) (ILE646) [view usage] : b.1.27.1 |Immunoglobulin-like beta-sandwich |CalX-like |CalX-beta domain |Sodium/calcium exchanger 1 |Dog (Canis familiaris) [TaxId: 9615]
d1mpya2 : (GLY210) (GLU220) [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |Catechol 2,3-dioxygenase (metapyrocatechase) |Pseudomonas putida, mt2 [TaxId: 303]
d1wh0a_ : (GLY7) (ALA18) [view usage] : b.15.1.3 |HSP20-like chaperones |HSP20-like chaperones |GS domain |Ubiquitin carboxyl-terminal hydrolase 19, USP19 |Human (Homo sapiens) [TaxId: 9606]
d2gnnb_ : (GLY90) (CYS104) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Orf virus [TaxId: 10259]
d1efva1 : (GLY180) (SER192) [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2d7qa1 : (VAL14) (THR25) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin C |Human (Homo sapiens) [TaxId: 9606]
d4uo0c_ : (PHE125) (LYS156) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/equine/richmond/1/2007)(h3n8)) [TaxId: 560387]
d1aym3_ : (TRP27) (PRO37) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus 16, (HRV-16) [TaxId: 31708]
d2da3a_ : (THR9) (LYS18) [view usage] : a.4.1.0 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fath1 : (ASP101) (SER112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d2xy1a1 : (ALA210) (THR221) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cspa1 : (SER11) (ASP23) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Rim binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d3qjgb_ : (GLY137) (GLU147) [view usage] : c.34.1.0 |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d2oz4a1 : (ALA285) (GLU297) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ii7b_ : (ASP137) (SER148) [view usage] : d.159.1.4 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DNA double-strand break repair nuclease |Mre11 |Pyrococcus furiosus [TaxId: 2261]
d1b1xa2 : (GLY406) (LYS416) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Horse (Equus caballus) [TaxId: 9796]
d1l6oa_ : (GLY332) (HIS344) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Segment polarity protein dishevelled homolog Dvl-2 |African clawed frog (Xenopus laevis) [TaxId: 8355]
d4dq1a_ : (ASP305) (ALA314) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Staphylococcus aureus [TaxId: 158878]
d1hgfa_ : (PHE125) (LYS156) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1v77a_ : (VAL7) (ASP16) [view usage] : c.6.3.2 |7-stranded beta/alpha barrel |PHP domain-like |RNase P subunit p30 |Ribonuclease P protein component 3, Rnp3 |Pyrococcus horikoshii [TaxId: 53953]
d1fpn3_ : (TRP27) (PRO37) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus A 2 (HRV-2) [TaxId: 12130]
d2yd4a1 : (PRO31) (ILE42) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1a34a_ : (LYS30) (GLN48) [view usage] : b.121.7.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Satellite viruses |Satellite viruses |STNV coat protein |Satellite tobacco necrosis virus [TaxId: 12881]
d1yfba_ : (PHE2) (LYS11) [view usage] : b.129.1.3 |Double-split beta-barrel |AbrB/MazE/MraZ-like |AbrB N-terminal domain-like |Transcription-state regulator AbrB, the N-terminal DNA recognition domain |Bacillus subtilis [TaxId: 1423]
d1dgir_ : (VAL29) (PHE40) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Poliovirus complexed with three domain CD155 |Human poliovirus type 1 [TaxId: 12080]
d2dptb_ : (LEU3) (ALA28) [view usage] : d.108.1.6 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |LFTR-like |automated matches |Escherichia coli [TaxId: 562]
d1mspa_ : (GLY113) (LEU126) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Pig roundworm (Ascaris suum), alpha isoform [TaxId: 6253]
d1k42a_ : (THR156) (SER166) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |Carbohydrate binding module from a thermostable xylanase |Rhodothermus marinus [TaxId: 29549]
d4hbqa2 : (ASN94) (PRO105) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f2nc_ : (ASN53) (SER70) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Sobemovirus coat protein |RYMV (Rice yellow mottle virus) [TaxId: 31744]
d1kz9e_ : (GLY7) (GLU17) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1e0oa_ : (LYS105) (PRO136) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
d2r49a_ : (ASP6) (GLN19) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Fibrobacter succinogenes [TaxId: 833]
d2zkrd1 : (GLU14) (VAL26) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Dog (Canis familiaris) [TaxId: 9615]
d3elwa_ : (GLY249) (PRO260) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]
d2k7va_ : (GLU4) (GLU19) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1z69a_ : (SER55) (TYR66) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Methanosarcina barkeri [TaxId: 2208]
d3sc6c_ : (ALA246) (ASN257) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
d1bqsa2 : (ASN94) (PRO105) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Mucosal addressin cell adhesion molecule-1 (MADCAM-1) |Human (Homo sapiens) [TaxId: 9606]
d1q7fb_ : (ARG1023) (VAL1035) [view usage] : b.68.9.1 |6-bladed beta-propeller |NHL repeat |NHL repeat |Brain tumor cg10719-pa |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3heia_ : (ASP49) (GLU63) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pt5a_ : (PRO240) (LYS258) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
d1ja1a1 : (SER240) (GLU251) [view usage] : b.43.4.1 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |NADPH-cytochrome p450 reductase FAD-binding domain-like |NADPH-cytochrome p450 reductase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2byfa1 : (ASP56) (ASN69) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |Phospholipase C-epsilon-1 |Human (Homo sapiens) [TaxId: 9606]
d4dj7c_ : (SER11) (VAL33) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/netherlands/219/2003(h7n7)) [TaxId: 680693]
d1gsma2 : (ASN94) (PRO105) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Mucosal addressin cell adhesion molecule-1 (MADCAM-1) |Human (Homo sapiens) [TaxId: 9606]
d1jvxa_ : (ALA105) (ASN118) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d3k38a_ : (LEU455) (ALA465) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza B virus, different strains [TaxId: 11520]
d2cg4b2 : (LEU142) (PRO152) [view usage] : d.58.4.2 |Ferredoxin-like |Dimeric alpha+beta barrel |Lrp/AsnC-like transcriptional regulator C-terminal domain |Regulatory protein AsnC |Escherichia coli [TaxId: 562]
d2xacb_ : (ALA44) (GLN55) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2io3b1 : (ASP82) (GLY93) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-2 |Human (Homo sapiens) [TaxId: 9606]
d4dj6a_ : (SER11) (VAL33) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/netherlands/219/2003(h7n7)) [TaxId: 680693]
d4lihb_ : (GLY378) (GLU387) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1ti8a1 : (SER21) (VAL43) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1hehc_ : (GLY632) (ALA642) [view usage] : b.2.2.1 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family II |Endo-1,4-beta xylanase D, xylan binding domain, XBD |Cellulomonas fimi [TaxId: 1708]
d1ug2a_ : (SER5) (ASN23) [view usage] : a.4.1.3 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Myb/SANT domain |2610100b20rik gene product |Mouse (Mus musculus) [TaxId: 10090]
d3qj7a_ : (ASN250) (PRO260) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3oska_ : (MET3) (SER14) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2klta_ : (ALA502) (VAL514) [view usage] : b.1.27.1 |Immunoglobulin-like beta-sandwich |CalX-like |CalX-beta domain |automated matches |Dog (Canis familiaris) [TaxId: 9615]
d3m5ge_ : (ALA21) (VAL43) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 490450]
d1ncwh1 : (ALA100) (VAL111) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
d4lpxa_ : (GLY65) (ASN84) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Artificial gene [TaxId: 32630]
d3emda_ : (GLY249) (PRO260) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]
d3alsa_ : (TYR145) (LEU156) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Cucumaria echinata [TaxId: 40245]
d4qtbb_ : (GLU339) (GLU351) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ktza_ : (ILE37) (ASP46) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Gelonium multiflorum [TaxId: 3979]
d3gvha1 : (ASP73) (PRO85) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d2ww4a1 : (MET1) (ASN12) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE |Escherichia coli [TaxId: 562]
d4qeda_ : (ASP82) (ASP94) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Staphylococcus epidermidis [TaxId: 1282]
d3vboc_ : (ASN27) (PRO37) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1mpea_ : (MET1) (LYS13) [view usage] : d.15.7.1 |beta-Grasp (ubiquitin-like) |Immunoglobulin-binding domains |Immunoglobulin-binding domains |Immunoglobulin-binding protein G, different constituent domains |Streptococcus sp., group G [TaxId: 1306]
d3vlbb_ : (ASN211) (ILE223) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d3c49a2 : (HIS404) (GLU418) [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dtgd1 : (SER94) (LYS107) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d1ndgb2 : (SER420) (GLY433) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d4rn7a_ : (ASP189) (ASN201) [view usage] : c.56.5.0 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |automated matches |automated matches |Peptoclostridium difficile [TaxId: 272563]
d2d9ca_ : (THR115) (VAL128) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2iqqa1 : (ILE102) (LYS115) [view usage] : d.81.2.1 |FwdE/GAPDH domain-like |Serine metabolism enzymes domain |Serine dehydratase beta chain-like |L-serine dehydratase SdhL, N-terminal domain |Legionella pneumophila [TaxId: 446]
d1grwc_ : (GLY113) (PRO126) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2io2b_ : (ASP86) (GLY97) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-1 (smt3 homologue) |Human (Homo sapiens) [TaxId: 9606]
d3emba_ : (GLY249) (PRO260) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]
d1t85a_ : (ILE395) (TRP406) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-CAM |Pseudomonas putida [TaxId: 303]
d1dl6a_ : (GLY38) (GLY49) [view usage] : g.41.3.1 |Rubredoxin-like |Zinc beta-ribbon |Transcriptional factor domain |Transcription initiation factor TFIIB, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1vaea_ : (SER10) (HIS20) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Rhophilin-2 |Mouse (Mus musculus) [TaxId: 10090]
d1rhi3_ : (SER27) (PRO37) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus 3, (HRV-3) [TaxId: 44130]
d2omxb_ : (SER1) (GLU11) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Human (Homo sapiens) [TaxId: 9606]
d2zuja_ : (ILE395) (TRP406) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-CAM |Pseudomonas putida [TaxId: 303]
d1eapb1 : (TYR110) (SER123) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1bvza2 : (ASN504) (LYS512) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Maltogenic amylase |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
d1mdqa_ : (ALA105) (ASN118) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d3rzua_ : (GLY327) (THR339) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |Catalytic domain of AMSH |Human (Homo sapiens) [TaxId: 9606]
d3h12a1 : (SER2) (PRO16) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
d4hgkc_ : (TRP110) (HIS123) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Dogfish (Squalus acanthias) [TaxId: 7797]
d1vbla_ : (ASP308) (VAL319) [view usage] : b.80.1.0 |Single-stranded right-handed beta-helix |Pectin lyase-like |automated matches |automated matches |Bacillus sp. [TaxId: 132676]
d2bh7a2 : (GLN23) (TYR36) [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |Probable N-acetylmuramoyl-L-alanine amidase YbjR, N-terminal domain |Escherichia coli [TaxId: 562]
d2qbla_ : (ILE395) (TRP406) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-CAM |Pseudomonas putida [TaxId: 303]
d3cnka_ : (LYS2559) (VAL2572) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xzm2_ : (GLU28) (LEU38) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d4a17d_ : (GLU11) (VAL23) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3nn8b_ : (ASP1) (SER14) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.80, e.8, c.1, c.10, c.123, b.82, b.19, c.94, a.104, c.2, d.159, c.6, d.58, i.1, b.29, c.82, c.26, b.30, c.56,
d.117, c.66, c.124, d.165, e.18, i.6, f.4, d.144, d.166, b.18, d.169, d.14, b.121, d.81, b.2, d.32, e.7, b.1, d.126, d.108,
c.97, b.129, b.42, c.51, b.84, d.19, b.52, c.16, d.118, d.131, b.34, a.4, e.26, c.34, c.88, d.15, b.43, d.16, d.93, d.54,
b.71, b.15, c.27, g.17, b.36, d.9, g.41, a.7, a.6, e.61